Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14593g00004 ATGCCTGTTGTGACAGAACACATGAAATGGAGAAGACCAAGAAACCAATTCAGACACTCCATTTCAGAAACTGATGCAAACCCTCAAACCCCTTCCATAACCCAATCCTCTCACAGCAAATCCACCATCTCCTCCCTCTTATCTTCTCTCTCCACCGCCACAACCTCCAATGGAACCACACATTCCAGAGACCAAAACAAAAACAACAACAAAAAAAGTAACAGAAAATTCTCTGCAGCAACCTTCAGGGGGTTCGGCTGCACCGCCGGCGCGTCGCAGAAGGTGTCGGTGCCGGCGGTGATTCGCTCCTCGGCGGATTGGGAAGGGACGAGGAACAGAAAGAAGAAGCACAGAAGGAACGGTAACAGTGGGAAAACATGTGATGAGGTTGTTGACGATGGTTCTGTTAAAACATGTGTGGATTTTCAGGATGTTTGGTGTGGCCCTGGAATTGGGTTCTCAACTGATGCTGTTACTAGGAAGAACGTGTCTGCAAGAGGAAAACTCGATGTGGTGGAGAGGGTAACGCACAGAGAGCGTCCTTGTTATTTTGGAAGGCGCACTGTGAAGCCAGAAAGCTTCCCATTTGTGGATGATGATCCTGACATTTTCGCAGCACGTCCTGGATTAGAGCCTTTTGGAACTGCTAGATTCTATCGCCATGTTCCACACCCTTCCTCTGATGGTCTTGCTCAGATAATGATAATTCAAGGAAGAATAATGATGGGGGGACGATTAGACTCACACGACCAATTTAGTGAGTGGAGACTTGACGTTGATGACATGTCATACGAGGAATTGCTTGAACTGGGTGAGAGAATTGGTTATGTCAACACTGGGCTCAAAGAAGATGAAGTGGGACTCAACATAAGGAAGGTCAAGCTTCCTAGTTCAAATGATACAACAAAGCATCAAATAGACAAACAGTGCAGCGTTTGTCAGGAGGAGTACGAATCAGATGATGAGCTGGGGAGATTGAAGTGTGAACACTGCTATCATTTTCAGTGTATAAAACAATGGCTTGTGCATAAAAACTTCTGCCCAGTTTGTAAGCAAGAAGTTGTGGTTCGACCGTGA 1077 0.4615 MPVVTEHMKWRRPRNQFRHSISETDANPQTPSITQSSHSKSTISSLLSSLSTATTSNGTTHSRDQNKNNNKKSNRKFSAATFRGFGCTAGASQKVSVPAVIRSSADWEGTRNRKKKHRRNGNSGKTCDEVVDDGSVKTCVDFQDVWCGPGIGFSTDAVTRKNVSARGKLDVVERVTHRERPCYFGRRTVKPESFPFVDDDPDIFAARPGLEPFGTARFYRHVPHPSSDGLAQIMIIQGRIMMGGRLDSHDQFSEWRLDVDDMSYEELLELGERIGYVNTGLKEDEVGLNIRKVKLPSSNDTTKHQIDKQCSVCQEEYESDDELGRLKCEHCYHFQCIKQWLVHKNFCPVCKQEVVVRP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14593g00004 358 MobiDBLite consensus disorder prediction 20 64 - -
Mupr14593g00004 358 MobiDBLite consensus disorder prediction 102 126 - -
Mupr14593g00004 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 356 IPR013083 -
Mupr14593g00004 358 SMART ring_2 310 350 IPR001841 -
Mupr14593g00004 358 FunFam E3 ubiquitin-protein ligase rnf12-A 277 356 - -
Mupr14593g00004 358 MobiDBLite consensus disorder prediction 1 76 - -
Mupr14593g00004 358 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Mupr14593g00004 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 24 354 IPR045191 GO:0061630
Mupr14593g00004 358 Pfam Ring finger domain 309 351 IPR001841 -
Mupr14593g00004 358 SUPERFAMILY RING/U-box 309 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14593g00004 Mupr-Chr14593 26092 31622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14593g00004 4 265 C3H Transcription Factor Family AT1G73760 37.586 1.47e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14593g00004 - - gmx:100818517 536.184