Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14592g00001 ATGGACTGGAATTTGAAAGCACCTTCTTGGGATTTGGTGGATGTGGATAAGGCAACGTCACTACCCAGCATAGAAACAATGGAGGAGCAAAACAGATTTGGAGTTTATAGAATGAAAGGGGAGTTTTCTGTTGACTTGAAGCTTGGTCAAGTGGGGAACTCTGGCACTGAATCAGCACTATCAAAGTCCAAAGATGTTGCTGCTGCTACTAGTGGTGTTGGAGTCTCCAAAATGGCATCCTCACCTTCAGGGTCTTCTAAAAGAGCTAGGGCCATTAACAGCACAACCCTGACAGTGTCATGCCTTGTGGATGGGTGCAATTCAGATCTTAGCAATTGTAGAGATTACCATAGGCGCCATAAGGTCTGTGAACTCCATTCCAAGACCCCAGAGGTCACAATTGCTGGCCTTAAGCAAAGGTTCTGCCAACAATGTAGCAGGTTCCATTCGCTGGAGCAATTTGATGAAAGAAAAAGAAGCTGCAGGAAACGTTTAGATGGACACAACAGACGGAGAAGAAAGCCTCAGCCAGAACCTCTCACGCGACCTGGTAGTTTTTTGTCCAATTACCAAGGCACCCAATTGCTACCCTTCTCAAGTCCACATATATATCCTTCGACTGCCATGGTGAGCCCGACTTGGAGTGGAGGACTTGTGACTTCCTCTGCAGATGCTAGGTTGCACAACCACCACCACCACCAAGTGCATTTGGTTGACAAACAAGACCTTTTTCTTGGATCTTCTCACAAGGAAGGGAAGCAAGTGGCATTCCTCCATGGTAGCCACCCCTCCACGGCTGCACTGAGCAACCAAACCCCGCCTTTTCCATCTCCTTCCGTGTGCCACACGCTTCTCAGGACCAGCCCTCTATCAGAAACTTGCGGAGCGAGAAGCAAAATGTTCTGTGAAAACTTAACAAGCAATTCGGTGCATGACTCTCCTTGTGCTCTCTCTCTTCTGTCATCATCACAGACGCACACGCCCGGGAATGGTTTGAATCAAATGGTGCAGCAGGCTCCATCGATGTCCCTCATGCAGCCCTTAGGCTTGAGCCTGCAGGATAGCAGCTTAGAGTCCGTGGAGCGAGTCTTGGTTCCCAATGGGAGTGACCATTGTTCCTCCATGTATAGCTTGGGTTCTGATGGATCCCAGTGCAATGAAGCCCCTCAACTCTTCCCCTTTCAATGGGAATAG 1194 0.4883 MDWNLKAPSWDLVDVDKATSLPSIETMEEQNRFGVYRMKGEFSVDLKLGQVGNSGTESALSKSKDVAAATSGVGVSKMASSPSGSSKRARAINSTTLTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTIAGLKQRFCQQCSRFHSLEQFDERKRSCRKRLDGHNRRRRKPQPEPLTRPGSFLSNYQGTQLLPFSSPHIYPSTAMVSPTWSGGLVTSSADARLHNHHHHQVHLVDKQDLFLGSSHKEGKQVAFLHGSHPSTAALSNQTPPFPSPSVCHTLLRTSPLSETCGARSKMFCENLTSNSVHDSPCALSLLSSSQTHTPGNGLNQMVQQAPSMSLMQPLGLSLQDSSLESVERVLVPNGSDHCSSMYSLGSDGSQCNEAPQLFPFQWE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14592g00001 397 Gene3D - 93 162 IPR036893 GO:0003677|GO:0005634
Mupr14592g00001 397 FunFam Squamosa promoter-binding-like protein 14 92 162 - -
Mupr14592g00001 397 ProSiteProfiles Zinc finger SBP-type profile. 98 175 IPR004333 GO:0003677
Mupr14592g00001 397 Pfam SBP domain 101 174 IPR004333 GO:0003677
Mupr14592g00001 397 MobiDBLite consensus disorder prediction 162 186 - -
Mupr14592g00001 397 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 54 390 IPR044817 GO:0003677
Mupr14592g00001 397 SUPERFAMILY SBT domain 99 180 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14592g00001 Mupr-Chr14592 9369 12245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14592g00001 1 397 SBP-box Gene Family AT5G50670 41.463 7.27e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr14592g00001 SBP 5.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14592g00001 - - gmx:100787407 620.157