Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1458g00001 ATGGCGGCGCCTGCGAACAATTTGAACCTTTCCATTGTTCCCGTGGCAAATCCTGGAGAGAAGGGAAACGAGATTGACGAGAGTGAATTATTCCATGAAGGGATGAACAACTCTGCATTCTCCACAATGCAAAGACTATTATTTCCGGGTCTGAATAGGGAGAGGGAGATGTCCGCTATGGTCTCAGCTTTGACCCACGTGGTCGCCGGAGAGGTGCCAAGCGGTGACTCTGCGGTTGGAGGAGCTCATGATGCTGTCACACCAACCATACCTTCTTCTTCTCCTACAACATCACCTTTGCCTTCTTCATCTAATTATGATGTTGCCACCTCTTCTCTCAAGAGAAGTAGAGAACTTGATACATCCTTCTCACACGCCGCTTCATCCCATGCTGCGCCAACAAGTGGAGAAGATTTAAAAAAGTGGAGAAGCAGCACAAGGGAAATGGGAAATGCTGTGTACGAATACAGAAGAACAGGAAATGAGGGGAGAGAAGAGGGAAGGAGAAAATACAGAGGGGTGAGGCAGAGACCGTGGGGGAAATGGGCGGCAGAGATAAGAGACCCATTCAAAGCAGCGAGGGTGTGGTTAGGGACGTTTGACACGGCAGAGGCAGCTGCTAGAGCCTACGATGAAGCTGCCCTTCGTTTCAGAGGCAACAAGGCCAAACTTAACTTTCCTGAGAATGTCACACTTCGCCAACCTCAATTAACTCTTTCCAATTCTCCACCCAATTCTCTTGTGTCTATTACAACTTCCACCGACCCACTTGTTCACACCCAACCTCATCTGCCTTCTCAGGTTCCAACCAACTTTTCCGATTATTTTCAGCTTCCGGCCTTTCCCACCAACCTTTATGATCATCGGATGTTTGTCACGTCTAGCATGGCTTCTCATCTTCAATCTTCGTCGTCGCCACCAGCCTCCTTGTCTTCTTCCTCTGCGTTTGCTTCCTCTATAACTTCTTCTCAGGACACTTCTCTTTCTTCTTTCTATTCTACGCAGTTGCCGCCGTGGTCATCCTCTGCCCATAGCTCTTCTTCCTCGGGATAA 1053 0.4872 MAAPANNLNLSIVPVANPGEKGNEIDESELFHEGMNNSAFSTMQRLLFPGLNREREMSAMVSALTHVVAGEVPSGDSAVGGAHDAVTPTIPSSSPTTSPLPSSSNYDVATSSLKRSRELDTSFSHAASSHAAPTSGEDLKKWRSSTREMGNAVYEYRRTGNEGREEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPQLTLSNSPPNSLVSITTSTDPLVHTQPHLPSQVPTNFSDYFQLPAFPTNLYDHRMFVTSSMASHLQSSSSPPASLSSSSAFASSITSSQDTSLSSFYSTQLPPWSSSAHSSSSSG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1458g00001 350 ProSiteProfiles AP2/ERF domain profile. 170 227 IPR001471 GO:0003700|GO:0006355
Mupr1458g00001 350 PANTHER DNA-BINDING DOMAIN 129 319 IPR044808 GO:0003700|GO:0009873
Mupr1458g00001 350 PRINTS Ethylene responsive element binding protein signature 193 209 IPR001471 GO:0003700|GO:0006355
Mupr1458g00001 350 PRINTS Ethylene responsive element binding protein signature 171 182 IPR001471 GO:0003700|GO:0006355
Mupr1458g00001 350 Pfam AP2 domain 170 219 IPR001471 GO:0003700|GO:0006355
Mupr1458g00001 350 Gene3D AP2/ERF domain 169 229 IPR036955 GO:0003700|GO:0006355
Mupr1458g00001 350 SMART rav1_2 170 233 IPR001471 GO:0003700|GO:0006355
Mupr1458g00001 350 MobiDBLite consensus disorder prediction 74 144 - -
Mupr1458g00001 350 MobiDBLite consensus disorder prediction 329 350 - -
Mupr1458g00001 350 FunFam Ethylene-responsive transcription factor 2 169 228 - -
Mupr1458g00001 350 SUPERFAMILY DNA-binding domain 170 228 IPR016177 GO:0003677
Mupr1458g00001 350 CDD AP2 170 229 IPR001471 GO:0003700|GO:0006355
Mupr1458g00001 350 MobiDBLite consensus disorder prediction 87 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1458g00001 Mupr-Chr1458 1917 3334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1458g00001 168 232 AP2-EREBP Transcription Factor Family AT5G61890 84.615 1.11e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1458g00001 AP2 4.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1458g00001 - - gmx:100796247 301.982