Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14574g00004 ATGGGAGAGGGAGAGAACATAGAAGTAGAAACTGAAACAGAACCCGAAGCATCCTCGCCATGGAACCTGGGAAAACACGCTCAGATAATTGAGCTGTCGGAGAAGCTGACGAACGGAAACCTCGGCGCCAAGATTGAGGCTGCGAGGGAGATAAGGAAGATGGTTAGGAAATCCTCGTCGTCGTCGAAGACACGTGCCAAGCTGGCCGCAGCAGGTGTGATTGAACCGCTCGTGTCGATGCTCTCTTCTTCCAACATCGACGCTCGCCAATCCTCGCTCCTCGCTCTCCTCAACCTCGCTGTTCGCAACGAACGAAACAAGGTCAAAATAGTGATAGATGGCGCCATGGCTCCACTGGTGGAGCTCCTCAAGATGCAAAATAGCGGTATACGAGAATTGGCTACAGCTGCAATCTTGACGCTCTCGGCTGCTGCACCCAACAAGGCCATCATTGTTGCTTCTGGAGCAGCACCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTCACTGCCCTCCATAATCTTTCCACCAGCATTGACAATTCCACTGAACTTCTTGATGCCAGTGCTGTTTTCCCTCTGATCAACCTCCTCAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCCACAGCACTACTTGAAATCCTTTCCAACTCGGAAGAAGGACGAACCGCAATCACAATTGCAGATGGCGGAATCTTAACACTAGTAGAGACAGTTGAAGATGGATCACTTGTCAGCACGGAACACGCTGTCGGAACTCTGTTATCGTTGTGTCTAAGCTGCCGAGATAAATACCGGGAACTGATCTTGAAAGAAGGAGCGATTCCGGGTCTGTTGCGTCTGACAGTGGAGGGGACAGCTGAAGCTCAAGATAGAGCTCGTATGCTTCTGGATTTGCTCAGAGATTCCCCCCCAGAAAAAAGACTAACATCATCAGTTTTGGAGAAAATTGTTTATGACATTGCTGAAAGGGTAGATGGAGCAGACAAAGCTGCTGAAACTGCCAAACGGTTATTGGAAGATATGGTTCAAAGGAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGTACTCCTTCTGTCATTCCATCCACTTGA 1140 0.4851 MGEGENIEVETETEPEASSPWNLGKHAQIIELSEKLTNGNLGAKIEAAREIRKMVRKSSSSSKTRAKLAAAGVIEPLVSMLSSSNIDARQSSLLALLNLAVRNERNKVKIVIDGAMAPLVELLKMQNSGIRELATAAILTLSAAAPNKAIIVASGAAPLLVQILKSGSVQGKVDAVTALHNLSTSIDNSTELLDASAVFPLINLLKECKKYSKFAEKATALLEILSNSEEGRTAITIADGGILTLVETVEDGSLVSTEHAVGTLLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARMLLDLLRDSPPEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLEDMVQRSMEHSMKCIQHRAASCTPSVIPST 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14574g00004 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 72 114 IPR000225 GO:0005515
Mupr14574g00004 379 FunFam U-box domain-containing protein 4 5 370 - -
Mupr14574g00004 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 114 156 IPR000225 GO:0005515
Mupr14574g00004 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 240 IPR000225 GO:0005515
Mupr14574g00004 379 MobiDBLite consensus disorder prediction 1 20 - -
Mupr14574g00004 379 Gene3D - 21 373 IPR011989 -
Mupr14574g00004 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 155 197 IPR000225 GO:0005515
Mupr14574g00004 379 SMART arm_5 102 143 IPR000225 GO:0005515
Mupr14574g00004 379 SMART arm_5 144 184 IPR000225 GO:0005515
Mupr14574g00004 379 SMART arm_5 185 227 IPR000225 GO:0005515
Mupr14574g00004 379 SMART arm_5 228 269 IPR000225 GO:0005515
Mupr14574g00004 379 SMART arm_5 61 101 IPR000225 GO:0005515
Mupr14574g00004 379 SUPERFAMILY ARM repeat 34 324 IPR016024 -
Mupr14574g00004 379 Pfam Armadillo/beta-catenin-like repeat 146 183 IPR000225 GO:0005515
Mupr14574g00004 379 PANTHER U BOX DOMAIN-CONTAINING 28 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14574g00004 Mupr-Chr14574 11815 17731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14574g00004 27 312 U-box Gene Family AT3G54790 39.373 2.96e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14574g00004 K08332 - gmx:100782472 618.231