Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1456g00006 ATGTTTTTACCTTTCGGTAATGGAAAGCCCATAAAGGAGAACAAGATTGATTGTGTAGGACAGATTCAACAAAGCTATGGTCTAAATAGTGAATTGAATTCTGAGTTTGGCAATTGTTCTAGTCAATGTTTTGATATTAGACAGGCTTCAAATATGGGAACTTGCAATCATCCACTTGCCATGGCTTTTGGTGGAGAAGTAGAACAGGAACCACACATAGGCCAAACCAAATCATCCAGCAGCATTATCAGCCGTTTTGAGTCACCAGCTTCAGCCTTTTATGCAACAGAAATCTACATGGGTTTCCCACAATATGATAGCCAAGTTGGTAACCCCTCTTTGATGTCTCAATTCTCTAAGATCAATGATTTGGAATTCCCTTTGTATCAATCTCCCAGGGAAAGCCTTTTCATGGCTTCATTAGCAAACCAACCTGCCCCCACCTTTGAGTTGTCAAACTCCTTGCAAGCAATGCTGAAATCTCAATTCAATAGTGATGAATGTTGTAGATCTCCTGAAATGTCTAATAAAATCCCATGTGGGAATTTCCCTGGCAGCAATTTTCTTCCAACTGAACAAACTAAGTTGTTCATTGATGATGCTGCCTCAATTAGTAGAAGCCCTTCAATTCCTTCCAAAGGAAATCAGGATCAAACAGTTTCTTGTGGCTCATATAATTTACCTGCTCCACAACTTAGCTTCTCTTCTCAGCAAGAGATGCTGTCTCCAACAGGTAGCATGTCAACTACTTCTGGAAACTCTTCTTCAAATGGAGCAGCAGTCTCAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAAAAAGCAACGCCAAAAGCTATATTGAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATACATGCCACAGTCAACTCAGGGGAAATCTGACAAAAGAACCAATGTAGAGAATGTGCATCTTGATGTCAAAACTGGCTTGCAAATTAGAGAGGCACTTCAGTTGCAGCTAGATGTTCAGAGGCGTCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGATGAGGATTGAGGAGCAAGGTAAGCAGCTGAAAATGATGTTTGACCAACAGCAGAAGACAAGTGATCATAGCCACTTGAATACTCAGAATTTGGACAATACAACCAATAATGATAAACCAAATAGTTCTAAAGATGTTCAGGTTTCCATTTCTGAAGGGTCTGAAAATATCTTATTCCCTTCCAAGATAATTCAGCACAGTTTTGTTGTTTGCTTCCTCTGCATTTCTTTCACCTTCACAAAATGCAGTCAACAAACCTCTACTTCGAGATATCTGAAGAAACTTTACATC 1413 0.3949 MFLPFGNGKPIKENKIDCVGQIQQSYGLNSELNSEFGNCSSQCFDIRQASNMGTCNHPLAMAFGGEVEQEPHIGQTKSSSSIISRFESPASAFYATEIYMGFPQYDSQVGNPSLMSQFSKINDLEFPLYQSPRESLFMASLANQPAPTFELSNSLQAMLKSQFNSDECCRSPEMSNKIPCGNFPGSNFLPTEQTKLFIDDAASISRSPSIPSKGNQDQTVSCGSYNLPAPQLSFSSQQEMLSPTGSMSTTSGNSSSNGAAVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSDKRTNVENVHLDVKTGLQIREALQLQLDVQRRLHEQLEIQRKLQMRIEEQGKQLKMMFDQQQKTSDHSHLNTQNLDNTTNNDKPNSSKDVQVSISEGSENILFPSKIIQHSFVVCFLCISFTFTKCSQQTSTSRYLKKLYI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1456g00006 471 NCBIfam myb-like DNA-binding domain, SHAQKYF class 264 319 IPR006447 GO:0003677
Mupr1456g00006 471 MobiDBLite consensus disorder prediction 388 421 - -
Mupr1456g00006 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 263 321 IPR017930 -
Mupr1456g00006 471 Pfam Myb-like DNA-binding domain 268 317 IPR001005 -
Mupr1456g00006 471 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Mupr1456g00006 471 Gene3D - 263 322 - -
Mupr1456g00006 471 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 247 418 IPR044848 GO:0003700
Mupr1456g00006 471 Coils Coil 350 370 - -
Mupr1456g00006 471 FunFam Myb family transcription factor 263 321 - -
Mupr1456g00006 471 MobiDBLite consensus disorder prediction 236 263 - -
Mupr1456g00006 471 SUPERFAMILY Homeodomain-like 262 318 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1456g00006 Mupr-Chr1456 18756 22503 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1456g00006 247 391 G2-like Transcription Factor Family AT4G28610 59.459 4.61e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr1456g00006 Myb_DNA-binding 5.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1456g00006 - - gmx:100780919 643.654