Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1456g00001 ATGCATCATTCATGGCAGGTATCGAACGGAGCACATAGCAGTCTAAGCAAGGTTGAAGGCTCAGAGAAAGACAGCTTCATCTTCCAGCAATATGTATTTGATGTTCCCGTTTCGTGTTTGAACTTCGATTCACAAGACCTGTTGGGTCTATCTTCTTGGGACAACTCAACTCCCCAGTTTGGAAGTGTTGCTCATTCTTTCTTGTCCAGCGATGAAGACACCTTTTGTGAAACGTATGGTGAAATTCCTTGCCGTGACGTGTCACTTCATCAGCATTTCGGATATCAACATAATAACATCTTGGAGGGTCATGATTCTGCCCCAGTTAATCGGGTTGAGAATGTTTATGTCACTTCTGGAAACTCTGCTTCTAGCATGGTTCCAACAAGGAAAAAAAGGATAAAATGGACCAACGATTTGCATGAACAATTCGTTGCCGCTGTTGATAGCCTTGGTGGTCCTCAAAAAGCAAAGCCTAAGGCAGTGCTAAAGATGATGGATTCAAAGTCACTCACCATTTTTCATGTTAAAAGCCACTTGCAGAAATATCGGACCACAACGTACGTGCAGAACAATTTCAAGGAGGGAAACGAAGAAAGGCAAGGCAGAGACATGGTGGCTGAACTTCAACAGAAAATACGTATGCAAATTGAGGAATCACGACAACTACAACTTGAGATTCGGGGGGGTATTCAACAACAATTGGAGGTTCAACGAAATTTGCAAATGCTAATCGAAGAACAAAAGAAACAGGTCAAAGGCGTTGGTGGCCATAAGCAAACAAAGCAAATTGGAGGATCCAAATCTTGGGAGAATAAGAAATCTACTAGGGTGGAATACATATATGATTTGGCTCATCTTGTCATCAAATTTGTGCTGGAAATAGACATCTCTAGCATAAGTAGTTGGCCGTTTAAATAA 921 0.4169 MHHSWQVSNGAHSSLSKVEGSEKDSFIFQQYVFDVPVSCLNFDSQDLLGLSSWDNSTPQFGSVAHSFLSSDEDTFCETYGEIPCRDVSLHQHFGYQHNNILEGHDSAPVNRVENVYVTSGNSASSMVPTRKKRIKWTNDLHEQFVAAVDSLGGPQKAKPKAVLKMMDSKSLTIFHVKSHLQKYRTTTYVQNNFKEGNEERQGRDMVAELQQKIRMQIEESRQLQLEIRGGIQQQLEVQRNLQMLIEEQKKQVKGVGGHKQTKQIGGSKSWENKKSTRVEYIYDLAHLVIKFVLEIDISSISSWPFK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1456g00001 306 FunFam Two-component response regulator 128 189 - -
Mupr1456g00001 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 188 IPR017930 -
Mupr1456g00001 306 SUPERFAMILY Homeodomain-like 129 185 IPR009057 -
Mupr1456g00001 306 Coils Coil 206 226 - -
Mupr1456g00001 306 Gene3D - 130 189 - -
Mupr1456g00001 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 114 276 IPR044848 GO:0003700
Mupr1456g00001 306 Pfam Myb-like DNA-binding domain 135 184 IPR001005 -
Mupr1456g00001 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 186 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1456g00001 Mupr-Chr1456 2675 5139 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1456g00001 115 250 G2-like Transcription Factor Family AT4G28610 47.826 7.03e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr1456g00001 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1456g00001 - - gmx:100776650 361.303