LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14568g00001	ATGGGGTGTGTGTTTGGGAAAGAAGCATCAAAGAGGAAAGAGGAAGTGGAAGTGGAAGTTGGAAGAGCAGAAGAGGGTGTGGTTCATAAGGGTGGAAAAGAGGAGAAGAACAAGCGGCCAAAAGGGGAGAGAAGGCGTTCTTCGAAGCCGAATCCGAGGTTGAGCAATCCACCTAACCATGTACATGGTGAGCAAGTGGCTGCAGGGTGGCCACCTTGGCTCTCCAAGGTTGCTGGGGAAGCTATCAGTGGATTGATCCCTAGAAGAGCTGACACTTTTGAGAAGCTTAATAAGATTGGACAAGGTACATATAGCAATGTTTACAAAGCAAAGGATACTTTGACAGGGAAAATTGTTGCCCTAAAGAAGGTTCGCTTTGACAATTTAGAGCCCGAGAGTGTGAAATTCATGGCCAGAGAGATTCTCATTCTGCGCCATCTGGATCATCCCAATGTTGTCAAACTGGAAGGTTTGGTGACTTCCAGGATGTCATGCAGTTTGTACCTTGTGTTTCAATACATGGACCATGATTTGGCTGGACTTGCTACAAGCCCCACAATTAAGTTCACAGAGTCTCAGGTCAAGTGTTACATGCATCAGCTACTTTCTGGATTGGAACACTGTCACAACCGGCACGTGCTGCATCGTGATATAAAGGGATCAAACCTTCTTATTGACAATGAAGGAGTTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCACAAGCACCCTATGACCAGCAGGGTGGTTACTCTTTGGTATCGACCTCCAGAACTTCTCCTTGGAGCCACTGATTATGGTGTAGGAGTGGACCTATGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGCAAGCCTATTATGCCTGGTCGAACCGAGGTGGAGCAGCTACATAAGATATTTAAGCTTTGTGGTTCTCCTGATGATGAATATTGGAAAAAATCAAAGTTGCCACATGCTACCATTTTTAAGCCCCGACAATCATACAAGCGGTGCATAGCAGAGACGTTTAGGAATTTCCCAACATCATCTCTGCCACTAATTGAGACCCTTCTCGCAATTGATCCAGCTGAACGTCAAACTGCCACAGCTGCATTGCATAGTGAATTCTTTACAACAAAACCTTATGCCTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATACAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCTGCTGGCAAAGCTAATGCTGGTGTCAAGAAATCACGTCCCCGTGATCGAGGTGGGAGGGGAATTCCAGTTCCAGATTCCAATGCTGAGTTGCAAGCAAATATTGATAGATGGCGACTGATAACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCTCATGAAGATGGAAGTCTAGGCTATCCTTTGGGTTCTTCACATCACATGGATCCAATTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTGTCATATCCTAAAACAAATTTCCAGACCTGGTCTGGCCCATTGGTGGAATCTGCTGTGGATGCACCAAGGAGAAAGAAGCACATGGTTGGAGATGGGCACACACAATCAAAGAAGGACTCCATGCCCATGTCTTGA	1632	0.4553	MGCVFGKEASKRKEEVEVEVGRAEEGVVHKGGKEEKNKRPKGERRRSSKPNPRLSNPPNHVHGEQVAAGWPPWLSKVAGEAISGLIPRRADTFEKLNKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRHLDHPNVVKLEGLVTSRMSCSLYLVFQYMDHDLAGLATSPTIKFTESQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGVLRIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPDDEYWKKSKLPHATIFKPRQSYKRCIAETFRNFPTSSLPLIETLLAIDPAERQTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDTKLRDEEARRLRAAGKANAGVKKSRPRDRGGRGIPVPDSNAELQANIDRWRLITHANAKSKSEKFPPPHEDGSLGYPLGSSHHMDPIFDPPDVPFSSTNLSYPKTNFQTWSGPLVESAVDAPRRKKHMVGDGHTQSKKDSMPMS	543

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14568g00001	543	ProSiteProfiles	Protein kinase domain profile.	93	377	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14568g00001	543	Gene3D	Phosphorylase Kinase; domain 1	82	175	-	-
	Mupr14568g00001	543	MobiDBLite	consensus disorder prediction	457	491	-	-
	Mupr14568g00001	543	Gene3D	Transferase(Phosphotransferase) domain 1	176	416	-	-
	Mupr14568g00001	543	SMART	serkin_6	93	377	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14568g00001	543	PANTHER	CELL DIVISION PROTEIN KINASE	91	381	-	-
	Mupr14568g00001	543	FunFam	probable serine/threonine-protein kinase At1g54610	176	417	-	-
	Mupr14568g00001	543	CDD	STKc_CDK9_like	93	377	-	-
	Mupr14568g00001	543	FunFam	probable serine/threonine-protein kinase At1g54610	80	175	-	-
	Mupr14568g00001	543	SUPERFAMILY	Protein kinase-like (PK-like)	88	382	IPR011009	-
	Mupr14568g00001	543	MobiDBLite	consensus disorder prediction	518	543	-	-
	Mupr14568g00001	543	MobiDBLite	consensus disorder prediction	518	533	-	-
	Mupr14568g00001	543	MobiDBLite	consensus disorder prediction	413	440	-	-
	Mupr14568g00001	543	MobiDBLite	consensus disorder prediction	7	41	-	-
	Mupr14568g00001	543	ProSitePatterns	Protein kinases ATP-binding region signature.	99	122	IPR017441	GO:0005524
	Mupr14568g00001	543	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468
	Mupr14568g00001	543	MobiDBLite	consensus disorder prediction	1	65	-	-
	Mupr14568g00001	543	Pfam	Protein kinase domain	93	377	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14568g00001	Mupr-Chr14568	6564	10427	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14568g00001	88	415	Core Cell Cycle Gene Families	AT5G10270	52.907	4.35e-119	359

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Mupr14568g00001		Pkinase	3e-68	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14568g00001	K08819		-	gmx:100791757	1015.76