Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14562g00001 ATGGGGTGGGGAGTGTTTGGTTCTGTTCTGGTTTTGGCACTCTTGTTCAAGCATTTGGCATCTCAGCAACCAAACACTGATGACTTCTTTGTGTCTGAGTTCTTGAAGAAGATGAGTTCAAGTTCAACATCCTACAACTTCTCTGCATCTGTGTGCTCATGGCAAGGGGTTTTCTGTGATGCCAGTAAAGAACATGTTGTTGACTTAGTCCTTTCTGGTATGAACCTCTCTGGCACTATACCTGACAACACCATAGGCAAGCTAGGAACACTTCAATCTTTGGATCTTAGCCACAACAAAATCACTGGCTTGCCTTCAGATTTCTGGAGTTTGAGCACCCTCAAGAGCCTTAACCTCTCCTCCAACCAGATTTCTGGCTCTTTGACCAACAACATTGGCAACTTTGGTTTGCTAGAAAGCTTTGACTTTTCCAGCAACAGTTTGGAAGAGGAAATTCCTGAAGCTGTTGGCTCACTGCTGAGTCTGAGAGTCCTCAAACTTGACCACAACAGGTTTGCACACAGCATACCTTCTGGGATACTCAAGTGCCAGTCTCTAGTTTCAATTGATCTTTCGTCAAATCAGCTCAATGGAACTCTTCCAGAAGGTTTTGGTGCTGCTTTTCCTAAGCTTAGGATTTTGAACCTTTCTGGGAATAATATGTCTGGTCGTATTTCTGATATTTCTGGGTTGAAGTCAATTGTGAGTCTCAACATATCAGGGAATTCGTTTCAGGGTTCTATTATGGATGTGTTTCAAGGAAGGTTGGAGGACCTGGACCTTAGCAGGAACCAATTTCAAGGTCACATTCCTCAGGTACAGTACAACTTTAGTAGTTACAATTGGTCTAATTTAGTTTATATGGATTTGTCAGAGAATAAGCTTAGTGGGGAATTTTTTCAAAATTTGAGTGAGTCATTGAATCTAAAGCACCTTAATTTTGCACACAATAGATTTGCCAGACAGAAATTCCCACAAATTGAAATGCTCCTGAAATTGGAATATTTGAACTTGTCCAAAACTAGCCTTGTTGATGAAATTCCTGATGAAATCTCACAATTAAGCAATTTGAGTGCACTTGATCTTTCTATGAATCATCTTAGTGGGAAAATTCCCTTACTGAGGAATGAACACCTCCAAGTTCTTGACCTTTCAAACAACAATTTGAGTGGAGCAGTTCCTCCATCTGTCTTGAAGAAACTCCCATGGATGGAGAAATACAACTTCTCCTATAATAACTTAACCCTTTGTGCTTCTGAAATCAAACCCGAGATCCTGCAAAAAGCATTCTTTGGATCATTGAACAGTTGCCCCCTTGCTGCAAACCCACGACTTTTCAAAAGAAGAGACACTGGACACAAGGGAATGAAGCTAGCTCTGGCATTAACCTTCTCAATGATCTTTCTCCTTGCTGGCCTTCTGTTTCTAGCATTTGGCTGCAGAAGGAAAACAAAAATGTGGGAATTCAAGCAAGGTTCATACAAAGAAGAACAAAACATTTCAGGTCCCTTCTCATTCCAGACTGACTCAACAACTTGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCAAGTAGTAATCTTTGAGAAGCCACTGCTGAACATCACATTTGCAGACCTCTTGGCTGCAACTTCAAATTTTGATAGGGGCACCCTTTTGGCTGAAGGAAAATTTGGGCCAGTCTATAGAGGCTTTCTGCCTGGTGGTATTCATGTGGCAGTTAAGGTCTTGGTTGTTGGTTCTACATTGACAGATGAAGAGGCTGCAAGAGAGCTAGAGTTTCTTGGTAGAATCAAACACCCCAATCTTGTTCCCTTAACTGGATATTGTGTAGCTGGGGATCAGAGAATTGCCATATATGATTACATGGAGAATGGTAACTTGCAAAACCTGCTCTATGACTTGCCACTTGGGGTACAAAGAACAGATGATTGGAGCACAGACACATGGGAAGAAGCTGACAATAATGCCATTCAAAATGCTGGCTCTGAAGGCTTACTCACATCTTGGAGATTTCGCCACAAGATAGCCCTCGGCACAGCTCGAGCATTGGCATTCTTGCACCATGGTTGCTCACCTCCAATAATTCACAGAGCTGTCAAGGCTAGCAGTGTTTACTTGGACTATGACTTAGAGCCAAGGTTGTCTGATTTTGGGTTGGCCAAGATTTTTGGAAGTGGCTTGGACGAGGAAATTGCGCGTGGCTCACCCGGTTATGTTCCGCCGGAGTTTTCTCAACCGGAATTTGACACTCCAACACCAAAATCTGATGTGTACTGTTTTGGAGTGGTTCTCTTTGAACTAGTGACTGGAAAGAAGCCAGTTGGAGATGATTACCATGATGACAAAGAAGCAACATTGGTAAGTTGGGTGAGAGGACTTGTGAGGAAGAACCAAGGTTCAAGAGCTATTGATCCAAAAATTCGTGACACTGGACCAGATGAACAAATGGAAGAGGCTCTTAAGATTGCTTATCTCTGCACTGCTGACCTTCCCTTCAAACGACCAAGCATGCAACAGATAGTTGGACTTCTAAAGGATATTGAACCTACTGCTACTTTGTTAGCACCATGA 2574 0.4254 MGWGVFGSVLVLALLFKHLASQQPNTDDFFVSEFLKKMSSSSTSYNFSASVCSWQGVFCDASKEHVVDLVLSGMNLSGTIPDNTIGKLGTLQSLDLSHNKITGLPSDFWSLSTLKSLNLSSNQISGSLTNNIGNFGLLESFDFSSNSLEEEIPEAVGSLLSLRVLKLDHNRFAHSIPSGILKCQSLVSIDLSSNQLNGTLPEGFGAAFPKLRILNLSGNNMSGRISDISGLKSIVSLNISGNSFQGSIMDVFQGRLEDLDLSRNQFQGHIPQVQYNFSSYNWSNLVYMDLSENKLSGEFFQNLSESLNLKHLNFAHNRFARQKFPQIEMLLKLEYLNLSKTSLVDEIPDEISQLSNLSALDLSMNHLSGKIPLLRNEHLQVLDLSNNNLSGAVPPSVLKKLPWMEKYNFSYNNLTLCASEIKPEILQKAFFGSLNSCPLAANPRLFKRRDTGHKGMKLALALTFSMIFLLAGLLFLAFGCRRKTKMWEFKQGSYKEEQNISGPFSFQTDSTTWVADVKQATSVQVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQRTDDWSTDTWEEADNNAIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYVPPEFSQPEFDTPTPKSDVYCFGVVLFELVTGKKPVGDDYHDDKEATLVSWVRGLVRKNQGSRAIDPKIRDTGPDEQMEEALKIAYLCTADLPFKRPSMQQIVGLLKDIEPTATLLAP 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14562g00001 857 Gene3D Ribonuclease Inhibitor 278 375 IPR032675 -
Mupr14562g00001 857 Gene3D Ribonuclease Inhibitor 177 277 IPR032675 -
Mupr14562g00001 857 ProSiteProfiles Leucine-rich repeat profile. 90 111 IPR001611 GO:0005515
Mupr14562g00001 857 ProSiteProfiles Leucine-rich repeat profile. 210 232 IPR001611 GO:0005515
Mupr14562g00001 857 FunFam Nuclear pore complex protein NUP107 28 178 - -
Mupr14562g00001 857 FunFam Calmodulin-binding receptor kinase CaMRLK 253 373 - -
Mupr14562g00001 857 Gene3D Ribonuclease Inhibitor 30 176 IPR032675 -
Mupr14562g00001 857 Gene3D Ribonuclease Inhibitor 376 449 IPR032675 -
Mupr14562g00001 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase 508 622 - -
Mupr14562g00001 857 PRINTS Leucine-rich repeat signature 91 104 - -
Mupr14562g00001 857 PRINTS Leucine-rich repeat signature 354 367 - -
Mupr14562g00001 857 ProSiteProfiles Leucine-rich repeat profile. 378 399 IPR001611 GO:0005515
Mupr14562g00001 857 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
Mupr14562g00001 857 SMART LRR_typ_2 159 183 IPR003591 -
Mupr14562g00001 857 SMART LRR_typ_2 111 135 IPR003591 -
Mupr14562g00001 857 SMART LRR_typ_2 88 110 IPR003591 -
Mupr14562g00001 857 SMART LRR_typ_2 330 354 IPR003591 -
Mupr14562g00001 857 SMART LRR_typ_2 377 400 IPR003591 -
Mupr14562g00001 857 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Mupr14562g00001 857 Pfam Leucine rich repeat 69 124 IPR001611 GO:0005515
Mupr14562g00001 857 ProSiteProfiles Protein kinase domain profile. 547 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr14562g00001 857 Pfam Leucine Rich repeat 376 391 IPR001611 GO:0005515
Mupr14562g00001 857 Gene3D Transferase(Phosphotransferase) domain 1 623 853 - -
Mupr14562g00001 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 227 848 - -
Mupr14562g00001 857 SUPERFAMILY Protein kinase-like (PK-like) 533 848 IPR011009 -
Mupr14562g00001 857 SUPERFAMILY L domain-like 38 419 - -
Mupr14562g00001 857 Pfam Protein tyrosine and serine/threonine kinase 551 843 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14562g00001 Mupr-Chr14562 2093 4666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14562g00001 68 848 Receptor kinase-like Gene Family AT5G07280 32.975 6.59e-114 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mupr14562g00001 PK_Tyr_Ser-Thr 3.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14562g00001 - - gmx:100787157 1542.71