Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14554g00001 ATGAGGGAATTTTGGGTCGTCATTATTGCATATAGGGAAAACACGAAAACCAGATCACGAGCCACGATAGTGGCCACTATTGGCTTATCATGTTTACAATGCCTGCAGGAAAGAGAATTAGCATTAAGGTCATTTAAAAGTGGCAACACTCCGATATTGGTTGCAACTGATGTGGCTGCACGTGGTCTTGATATTCCTCATGTTGCCCATGTGGTTAACTTCGACCTTCCTAATGATATAGATGATTATGTACACCGTATTGGACGGACAGGGCGAGCAGGAAAGAAAGGCCTTGCAACTGCGTTCTTTAATGACAACAATGCATCCCTAGCAAGGGCTTTAGCTGATCTGATGCAAGAAGCAAATCAAGAAGTACCTAATTGGCTCTCACGGTATGCTGCTCGCTCTGCCTTTGGTGGTGGTGGACGAAACCGTCGATCAGGGGGAGGCCGTTTTGGTGGCCGTGACTTTCGAAGAGATAGTTCTTTTGGTAGTAGTAGGGGTGGTGGTTCTGATTACTACAGTGGAGGAAACAATAGTGGTGGATATGGCACTTCTGGTGGGTCAATCAATCTCTTGGATAATGTTATATAA 594 0.4512 MREFWVVIIAYRENTKTRSRATIVATIGLSCLQCLQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASLARALADLMQEANQEVPNWLSRYAARSAFGGGGRNRRSGGGRFGGRDFRRDSSFGSSRGGGSDYYSGGNNSGGYGTSGGSINLLDNVI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14554g00001 197 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Mupr14554g00001 197 CDD SF2_C_DEAD 36 103 - -
Mupr14554g00001 197 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 133 IPR001650 -
Mupr14554g00001 197 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 35 133 - -
Mupr14554g00001 197 Gene3D - 17 137 IPR027417 -
Mupr14554g00001 197 MobiDBLite consensus disorder prediction 164 180 - -
Mupr14554g00001 197 SMART helicmild6 22 94 IPR001650 -
Mupr14554g00001 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 160 IPR027417 -
Mupr14554g00001 197 MobiDBLite consensus disorder prediction 140 180 - -
Mupr14554g00001 197 Pfam Helicase conserved C-terminal domain 36 94 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14554g00001 Mupr-Chr14554 511 2527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14554g00001 38 127 Eukaryotic Initiation Factors Gene Family AT1G72730 40.860 2.32e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14554g00001 K11594 - gmx:100784557 189.119