Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1454g00004 ATGCAAAGCTACATTAAAATTGATGAACAAGTGGTGCAACGCAAAATTCATAAGCCAAGGTGGCTTGAGGATTTTCTGAGAAAAACTTTCTTTGACTTATGCACAACTCATCCATATCGTAGGAATGAGTTAAATAAGTATTGTATAAACTGCAATTTGTCAGTTTGCCAATATTGTGCATCATCAGGTCCTCACCGCCATCACAAGATACTTAAAATCTATAGACATGTATACAAGGATGTTGTCTCCCTTGCATCTATGGAAAAGTATATAGACAGCTCACAAATTCAGCCTTACAAATGCAACAAGCGTCTAGTTATTTCTCTGAATCCTCTCCCACATTGTGGTTCAGCAATAAATAATGAGTCATCATGCAATACTTGCAATAGAAAATTGACCGAACCCGATTTATATCGCTATTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTTAAGTAAGCCTAATGATTCAGCTCCTCCTTTCATTTCCATCCAGACTCATCCTCCTCGTCCTTCTCAGGAAAAGCAAGAGGAAGCTTCTGAACTCCAAAAGTCATTAAAGAGAAGAAAGGGAATACCTCATAGAGCTCCCTTCTTCTAA 600 0.3817 MQSYIKIDEQVVQRKIHKPRWLEDFLRKTFFDLCTTHPYRRNELNKYCINCNLSVCQYCASSGPHRHHKILKIYRHVYKDVVSLASMEKYIDSSQIQPYKCNKRLVISLNPLPHCGSAINNESSCNTCNRKLTEPDLYRYCSISCKVKAVLSKPNDSAPPFISIQTHPPRPSQEKQEEASELQKSLKRRKGIPHRAPFF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1454g00004 199 Gene3D Classic Zinc Finger 27 102 - -
Mupr1454g00004 199 CDD Bbox2 33 73 - -
Mupr1454g00004 199 MobiDBLite consensus disorder prediction 158 199 - -
Mupr1454g00004 199 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 198 - -
Mupr1454g00004 199 ProSiteProfiles Zinc finger B-box type profile. 33 73 IPR000315 GO:0008270
Mupr1454g00004 199 MobiDBLite consensus disorder prediction 171 187 - -
Mupr1454g00004 199 Pfam B-box zinc finger 33 73 IPR000315 GO:0008270
Mupr1454g00004 199 Pfam PLATZ transcription factor 75 147 IPR006734 -
Mupr1454g00004 199 SUPERFAMILY B-box zinc-binding domain 32 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1454g00004 Mupr-Chr1454 27941 30011 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mupr1454g00004 PLATZ 4.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1454g00004 - - qsa:O6P43_014262 288.115