Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1454g00001 ATGGTTTTGTCATGGACAAGAGGGAGAGTATTCCGGCGTGGCCGAAAGGGGAAAGAGTTGAACTCCGGCGGCGATTTGGAGATAGAGGTTGCGATTCCCACCCACTTCCGGTGCCCGGTAACCTTGGACATGATGAAAGACCCGGTGACGGTGTCAACGGGGATAACCTACGACCGCGACAGCATCGAGAAGTGGATCGAGTCCGGGAACCGCACGTGCCCGGTCACCAAGACCGAGTTGACCAGCTTCGACATGATCCCCAACCACGCCATTCGCCGGATGATCCAGGATTGGTGCGTGGAGCACCGCTCCTACGGGATCGAGCGGATCCCCACTCCTCGGATCCCGGTCTCCCCGTACGAGGTGGCCGACGCGTGTACGAGGATCCTGTCGGCGGCACAAAACGGGGACGAGAACAAGTGCGTGGAGCTCGTGAGGAAGGTCAAGGCGTGGGGGAAGGAGAGCGAGAGGAACAAGAGGTGCATAGTGGGAAACGGTGCCGCTCTTGCGCTGGCTAACGCGTTTAACTCTTTCTCGCGCGGGGTGGTTGAGAAAAACGCTGTCGTTTTGGACGAGATCTTGGGGGCGCTGACGTGGATGCGTCCTCTTTCTGAAGAGGGTAGAACTGTGTTGGGATCCGTGACTTCTATTGGTTGCATGGTTTGGTTCATGAATGCTACAAATTTGTCTACGAGGGTGAACGCGGCTTTGTTGCTTAGGGAAATGCAGGTTGAGGCCTTGGTGAAAAGTGTAGGGGTTAACGTTGTTGAAGCTTTGGTGAACATGATTAAGGAGCCTGTTGGGAGTGCTGCTACCAAGGCATGCTTGTCAACGATTTTTAACTTGGTTTCTTCGGACAATAGTGGTGTGACTCGTGAAAGATTTGTGGAGTTGGGTTTGGTTTCGCTCTTGTTGGAGGTTCTTGTTGATGCGGAGAGAGGGGTGTGTGAGAAGGCTTTGGGGGTGTTGGATTGCGTTTGTGACTCTAAGCAAGGGGTGGAGATGGTGAAGGATAATGCTTTGACTTTGCCTGTTGTGATTAAGAAGCTATTGAGGGTGTCTGAGTTGAGTTCCAGCTTCGCGGTTTCGGTTCTTTGGAAGCTTTGTGACAAGAGAGAAGAAGAAAGGATGTTGATTGAGGCGCTTCAAATGGGGGTGTTTCATAAACTTCTTGTTTTGTTGCAAGTGGGGTGTGGGGAGAGTACGAAAGAGAAGGCTACGGAGTTGTTGAAATTGTTGAATACTTGCAGGAGCAAAGCTGAGTGTGTTGATTCGTCGTTGGATTTCAAGCACTTGAAGAAGCCTTTCTAA 1311 0.5202 MVLSWTRGRVFRRGRKGKELNSGGDLEIEVAIPTHFRCPVTLDMMKDPVTVSTGITYDRDSIEKWIESGNRTCPVTKTELTSFDMIPNHAIRRMIQDWCVEHRSYGIERIPTPRIPVSPYEVADACTRILSAAQNGDENKCVELVRKVKAWGKESERNKRCIVGNGAALALANAFNSFSRGVVEKNAVVLDEILGALTWMRPLSEEGRTVLGSVTSIGCMVWFMNATNLSTRVNAALLLREMQVEALVKSVGVNVVEALVNMIKEPVGSAATKACLSTIFNLVSSDNSGVTRERFVELGLVSLLLEVLVDAERGVCEKALGVLDCVCDSKQGVEMVKDNALTLPVVIKKLLRVSELSSSFAVSVLWKLCDKREEERMLIEALQMGVFHKLLVLLQVGCGESTKEKATELLKLLNTCRSKAECVDSSLDFKHLKKPF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1454g00001 436 Pfam U-box domain 32 103 IPR003613 GO:0004842|GO:0016567
Mupr1454g00001 436 SUPERFAMILY RING/U-box 28 108 - -
Mupr1454g00001 436 FunFam RING-type E3 ubiquitin transferase 26 108 - -
Mupr1454g00001 436 SMART Ubox_2 35 98 IPR003613 GO:0004842|GO:0016567
Mupr1454g00001 436 CDD RING-Ubox_PUB 33 85 IPR045210 -
Mupr1454g00001 436 PANTHER WDSAM1 PROTEIN 29 423 IPR045185 GO:0061630
Mupr1454g00001 436 SUPERFAMILY ARM repeat 129 418 IPR016024 -
Mupr1454g00001 436 ProSiteProfiles U-box domain profile. 31 105 IPR003613 GO:0004842|GO:0016567
Mupr1454g00001 436 Gene3D - 124 416 IPR011989 -
Mupr1454g00001 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 109 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1454g00001 Mupr-Chr1454 6368 7678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1454g00001 27 436 U-box Gene Family AT5G37490 47.229 1.21e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1454g00001 - - gmx:100795913 687.182