LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14549g00001	TTAGTGACTGGTTACAGAAATAAATTGTCGTTTATAAATGCATGTGCTAAGGCAATTGATTTGTGTCGTGTTGCAGTGAAAGCACTACAAGCAATATCGGATAAACTAGAGAACGTGAATTGGCAAGTCACAGAACGTTCCTGCACAGATGGAGGCTTTGGTGGCCAGATTAGTATAAATGATGACATCATGAAGAATGTCACATGCAATTGCACTTTCCAAAATAACACAGTTTGTCATGTTGATAACATGTATGATGAACTCTGCCAAGGATATTTTCTTGAAATCATCTTTCTCAAGGGTCAAAATATATCTGGAGTTTTCCCAAGTGAATTTGGAAATCTCACACAACTGAAAGTACTTGATCTTACTCGCAACTATCTCAATGGCTCACTTCCAACAAATTTTGGTCCCAACTCACTGGTCGTTTTGTCCCTTTTGGGAAACCGACTAAGTGGTCCAATTCCCACAGAAATTGGTGATATTGCTAGTCTGGAGGAGCTGGTCTTAGAATGTAACCAACTAGTAGGACCACTTCCTCCTAGTCTTGGAAATTTGAGCAAGTTGCATAGACTGCTTCTTTCTGCAAATAATTTTACTGGGACCATACCAGAAACATTTAGCAAGCTAAAGAATCTCACTGATTTTAGAATAGATGGAAGCAGTTTATCCGGACCAATACCCAGTTTCATTGGGAACTGGACCAAACTTGACAGATTGGATATGCAGGGAACATCTATGGAAGGCCCAATTCCTCCCACTATATCTCAGTTGAAACTTTTAACTGAATTGAGAATAACTGATTTGAATGGACCAAATATGACATTTCCTGATCTGAAGGATTTGAAAAACTTGAAACGACTAGACCTAAGCTTCAACATGTTGACTGGTTCAATCCCAGATTCAATACAGGATTTGAATAAGCTAGACTACTTGTTTCTGACAAATAATTCTCTGAGCGGACAAATTCAGGACTGGATACTGAGCTTCAGAAATAATATGAACTTGGCTTCAAGCCATTCTTCTTCAGCAGTAACTTCACCTTCAGGAACCTTCCTTGTGCAGGAAAACCCCAATAAGTCATTGTTCATAAACTGTGGAGGAGATCAGGGGGAGTTTGAAGGCATTAACTATGTAGGTGACCTCCAGCAAGATGGCATTTCAAACTTTATTCTTAGAAATGAAGGACAATGGGCTTATAGCAGCACAGGAGTATATTTGGGAAATGCTAATGGAAATTATATTGCACAAAATACATTTTCTTTGAATATTAGTGGTCCAGAATACTATCAAAATGCTCGCCTTTCCCCTCTGTCACTTAACTACTATGGCCTTTGTATGCCAAAGGGCAATTATAAAGTGAAGCTCCACTTTGCTGAGATAATGTTTTCTGATGACCGGACTTTTACCAGTCTAGGAAGGCGCATATTTGATGTTTCAGTTCAAGGTTTTAGATATTTGAAAGATTTTAATATTGTGGAAGCGGCTGGTGGAGTTGGAAAGGGAATCACTAAGGAATTTGATGTTGATGTTGATGATAGCACCTTGGAAATCCACTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTGAGATGATACCAAACTTTGAGAATCCTTCAAAAGGGCTGTCTGCTGGAGCTATTGTTGGAATTGTTGCTGCATCATGTGGCCTTGTCATATTGATATTGGTTGCCCTTTGGAAGATGGGTTTCCTTGGTAGGAAAGATACAACAGATAAAGAACTTCTAGATATGAAAACGGGTTATTTCAGCTTAAGACAAATTAAAGCAGCTACTAATAACTTTGACCCTGCAAATAAGATTGGTGAAGGAGGATTTGGGCCTGTATACAAGGGTGTGCTGTCAGATGGTGATGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCGAAGCAAGGGAACCGTGAATTTGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTGGTGAAGCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTATTAATATATGAATACATGGAGAACAACAGTCTTGCTCGTGCACTTTTTGGTGAAGAAGAACAGAAGCTGCACTTGGAATGGCCCACAAGAATGAAGATCTGTATGGGAATAGCAAGGGGATTGGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTACACAGGGACATTAAGGCAACCAATGTCTTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGAAGAGAATACTCATATCAGTACACGGATAGCTGGAACAATTGGTTACATGGCTCCAGAATATGCTATGCGAGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAATTGTAGCTTTGGAGATTGTCAGTGGAAAAAGCAACACCAAATACAGGCCAAAGGAGGAGTTCGTATATCTTCTAGATTGGGCATATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGATGGATACAAGTCTTGGTTCAAAGTACTCCCACGAGGAGGCCATGAGAGTGCTGAGCTTGGCACTCTTATGCACCAACCCATCTCCCACTCTTAGACCATCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAAATCTCCAATCCAAGCGCCAGTAATCATGCACAATGAGAACAGCCAAGATGCAAGATTTAAAGCCTTTGAGTTGCTATCACAAGACAGCCAAACTCTTGCTTCTTCTGCATACTCACAATTAAGTGTGGAACAAAGACACAAATCAGAAGATGGACCATGGGTCGACTCCTCCATATCTCTTCCAAGTGGAGATTATTATTCTTCAACCAGTAAACTTGTTTAA	2889	0.4008	LVTGYRNKLSFINACAKAIDLCRVAVKALQAISDKLENVNWQVTERSCTDGGFGGQISINDDIMKNVTCNCTFQNNTVCHVDNMYDELCQGYFLEIIFLKGQNISGVFPSEFGNLTQLKVLDLTRNYLNGSLPTNFGPNSLVVLSLLGNRLSGPIPTEIGDIASLEELVLECNQLVGPLPPSLGNLSKLHRLLLSANNFTGTIPETFSKLKNLTDFRIDGSSLSGPIPSFIGNWTKLDRLDMQGTSMEGPIPPTISQLKLLTELRITDLNGPNMTFPDLKDLKNLKRLDLSFNMLTGSIPDSIQDLNKLDYLFLTNNSLSGQIQDWILSFRNNMNLASSHSSSAVTSPSGTFLVQENPNKSLFINCGGDQGEFEGINYVGDLQQDGISNFILRNEGQWAYSSTGVYLGNANGNYIAQNTFSLNISGPEYYQNARLSPLSLNYYGLCMPKGNYKVKLHFAEIMFSDDRTFTSLGRRIFDVSVQGFRYLKDFNIVEAAGGVGKGITKEFDVDVDDSTLEIHLYWAGKGTTAIPDRGVYGPLISAIEMIPNFENPSKGLSAGAIVGIVAASCGLVILILVALWKMGFLGRKDTTDKELLDMKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGEEEQKLHLEWPTRMKICMGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTKYRPKEEFVYLLDWAYVLQEQGNLLELMDTSLGSKYSHEEAMRVLSLALLCTNPSPTLRPSMSSVVSMLEGKSPIQAPVIMHNENSQDARFKAFELLSQDSQTLASSAYSQLSVEQRHKSEDGPWVDSSISLPSGDYYSSTSKLV	962

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14549g00001	962	Pfam	Malectin domain	361	543	IPR021720	-
	Mupr14549g00001	962	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	691	898	-	-
	Mupr14549g00001	962	CDD	STKc_IRAK	621	888	-	-
	Mupr14549g00001	962	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	359	548	-	-
	Mupr14549g00001	962	Gene3D	Phosphorylase Kinase; domain 1	581	690	-	-
	Mupr14549g00001	962	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g53440	25	202	-	-
	Mupr14549g00001	962	ProSiteProfiles	Protein kinase domain profile.	615	897	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14549g00001	962	Pfam	Protein tyrosine and serine/threonine kinase	619	885	IPR001245	GO:0004672\|GO:0006468
	Mupr14549g00001	962	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	203	270	-	-
	Mupr14549g00001	962	SUPERFAMILY	Protein kinase-like (PK-like)	596	887	IPR011009	-
	Mupr14549g00001	962	Gene3D	-	364	548	-	-
	Mupr14549g00001	962	SUPERFAMILY	L domain-like	56	336	-	-
	Mupr14549g00001	962	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	737	749	IPR008271	GO:0004672\|GO:0006468
	Mupr14549g00001	962	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	586	690	-	-
	Mupr14549g00001	962	SMART	serkin_6	615	886	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14549g00001	962	Gene3D	Ribonuclease Inhibitor	59	363	IPR032675	-
	Mupr14549g00001	962	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	28	916	-	-
	Mupr14549g00001	962	Pfam	Leucine rich repeat	280	319	IPR001611	GO:0005515
	Mupr14549g00001	962	Gene3D	Transferase(Phosphotransferase) domain 1	691	909	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14549g00001	Mupr-Chr14549	8661	17477	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14549g00001	24	953	Receptor kinase-like Gene Family	AT1G53430	58.698	0.0	1103

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mupr14549g00001		PK_Tyr_Ser-Thr	2.4e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14549g00001	-		-	gmx:100815226	1564.67