Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14539g00001 ATGAAGAAATTTGTGGTGAAGCTACCAATCAATGGAGATGATGACCTCAAACTGGTTTTTGATAAATGCATCAAGGGAGAATTAAGAGGGAAGACCCGAGTTCTTGTTACAAATCAGCTGCATTTCCTTTCACAGGTTGATAGAATCATTTTGGTCCATGAAGGTATGGTGAAGGAGGAGGGAACTTTTGAGGAACTCTCTAACCGGGGACCGCTGTTCCAAAAGCTTATGGAAAATGCGGGAAAGATGGAGGAGTATGAAGAAGAAGAGGTAGATACTGAAATCACAGATCAGAAGCCCTCTCCAAAACCTGTGGCCAATGGAGCAGTTAATGATTATGCAAAGAGTGGAAGTAAACCAAAAGAAAGAAAATCTGTCCTTATTAAACAAGAAGAGCGAGAAACAGGTGTTGTCAGCTTGAATGTTCTAATTAGGTACAAGAATGCATTAGGAGGGTTTTGGGTGGTTCTGGTACTCTTTGCATGCTATGTCTTGACGGAAACGTTACGAATATCAAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTGCTACAGTGGGTTATAACCCTGCCTTCTACAATATGATATATGCCGCCCTATCATTTGGTCAGGTTTTAGTGACTTTAACAAATTCTTATTGGTTAATTATATCAAGTCTTTATGCTGCCAGAAGGTTGCATGAAGCCATGCTTAGTTCCATATTACGAGCTCCCATGGTGTTTTTCCAAACAAATCCACTTGGAAGAGTTATCAACAGGTTCGCAAAGGATCTTGGTGACATTGATCGTAATGTTGCTCCATTTGTGAATATGTTTCTAGGTCAAGTATCCCAGCTTTTTTCAACATTCATCCTCATAGGCATTGTCAGCACAATGTCCTTGTGGGCGATACTGCCACTGTTGGTGTTGTTTTACATAGCTTATCTATACTATCAGAGCACTGCTCGTGAAGTGAAGCGCTTAGACTCGATTAGCAGATCTCCTGTTTATGCACAGTTTGGAGAAGCGCTGAATGGTTTATCAACTATTCGTGCTTACAAAGCATATGATCGAATGTCGGATATAAATGGTAAATCCATGGACAACAACATCCGTTTCACTCTGGTGAACATGAGCGGAAACCGATGGCTCGCAATCCGATTGGAAACTTTGGGAGGCATCATGATATGGTTCACTGCAACCTTTGCTGTCATGCAGAATGGGAGAGCAGAGAACCAGCAAGAATTTGCATCCACCATGGGGTTACTGCTTAGCTATGCTCTGAACATTACTAGTTTGCTTACTGGTGTGCTTAGGCTCGCAAGTTTGGCCGAGAATAGTTTAAACGCGGTTGAACGGATTGGCACTTACATAGATTTGCCCTCGGAGGCTCCCTCTATCATTGATGACAATCGCCCTCCTCCTGGCTGGCCTTCTTCGGGCTCAATAAGATTTGAAGATGTTGTTCTTCGCTACAGGCCTGAACTTCCTCCTGTGTTGCATGGCTTGTCTTTCACCATTTTCCCTAGTGATAAGGTTGGCATCGTTGGGAGGACAGGTGCAGGAAAATCCAGCATGCTTAATGCTTTGTTTCGAATTGTAGAATTGGAACGAGGACAAATATTAATTGATGATTGTGATGTTGCAAAGTTTGGGCTCGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAAGCTCCCGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCATTTAATGAACACAATGATGCTGACCTCTGGGAGGCTTTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCCGAGGTATCTGAGGCAGGCGAGAACTTCAGTGTTGGACAAAGGCAACTGTTGAGTCTTGCTCGGGCTTTGTTGCGTAGATCGAAGATATTAGTACTTGATGAGGCAACCGCAGCAGTGGATGTTAGAACAGATGCACTCATACAAAAAACAATTAGAGAGGAATTCAAATCCTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATTGATTGTGATCGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGGTAGCTCTTTCTCTAAGATGGTCCAAAGCACAGGAGCTGCAAATGCCCAATATTTACGCAGCTTAGCACTTGGTGGGGATAAGTCAGAAAGAGAAGAGAACAAGCATCTAGATGGCCGGAGAAAATGGCTGGCTTCTTCTCGATGGGCTGCTGCAGCCCAATTTGCTCTTGCCGTTAGTCTCACCTCATCCCAGAATGACCTACAACGATTGGAAGTGGAAGATGAAAATAGTATTCTCAAGAAGACAAAGGATGCTCTGATAACTTTGCAGGGGGTTTTTGAAAGGAAGCATGATAAAGAAATTGAGGAATCGTTAGACCAGCGCCAAATATCCCCAGAGGGATGGTGGTCATCGCTTTATAAAATGATTGAAGGGCTTGCTATGATGAGCAGATTGGCCAGGAACAGGCTCCATCAATCAGACTTCGGTTTTGAGGATAGATCAATTAACTTCGATCAAGAGCAAATGAGGTCTATCTGTCCTCGATTTGGTGCAAGGCAGGAGAGGGAAAGGTTGGGCTTAACCGAGAGT 2640 0.4341 MKKFVVKLPINGDDDLKLVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEELSNRGPLFQKLMENAGKMEEYEEEEVDTEITDQKPSPKPVANGAVNDYAKSGSKPKERKSVLIKQEERETGVVSLNVLIRYKNALGGFWVVLVLFACYVLTETLRISSSTWLSHWTDQSATVGYNPAFYNMIYAALSFGQVLVTLTNSYWLIISSLYAARRLHEAMLSSILRAPMVFFQTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLFSTFILIGIVSTMSLWAILPLLVLFYIAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMSDINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGIMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSIIDDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGQILIDDCDVAKFGLADLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLALGGDKSEREENKHLDGRRKWLASSRWAAAAQFALAVSLTSSQNDLQRLEVEDENSILKKTKDALITLQGVFERKHDKEIEESLDQRQISPEGWWSSLYKMIEGLAMMSRLARNRLHQSDFGFEDRSINFDQEQMRSICPRFGARQERERLGLTES 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14539g00001 880 SMART AAA_5 503 696 IPR003593 GO:0016887
Mupr14539g00001 880 Gene3D ABC transporter type 1, transmembrane domain 119 458 IPR036640 GO:0005524|GO:0016020
Mupr14539g00001 880 CDD ABC_6TM_ABCC_D2 156 452 IPR044726 GO:0140359
Mupr14539g00001 880 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 19 717 - -
Mupr14539g00001 880 Gene3D - 13 102 IPR027417 -
Mupr14539g00001 880 Pfam ABC transporter 494 642 IPR003439 GO:0005524
Mupr14539g00001 880 ProSitePatterns ABC transporters family signature. 614 628 IPR017871 GO:0005524|GO:0016887
Mupr14539g00001 880 Pfam ABC transporter transmembrane region 157 400 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr14539g00001 880 CDD ABCC_MRP_domain2 475 695 - -
Mupr14539g00001 880 FunFam Multidrug resistance-associated protein member 4 461 713 - -
Mupr14539g00001 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 78 IPR027417 -
Mupr14539g00001 880 FunFam ABC transporter C family member 2 120 458 - -
Mupr14539g00001 880 SUPERFAMILY ABC transporter transmembrane region 154 457 IPR036640 GO:0005524|GO:0016020
Mupr14539g00001 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 703 IPR027417 -
Mupr14539g00001 880 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 157 440 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr14539g00001 880 Gene3D - 460 713 IPR027417 -
Mupr14539g00001 880 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 477 711 IPR003439 GO:0005524
Mupr14539g00001 880 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14539g00001 Mupr-Chr14539 502 8309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14539g00001 474 717 Calmodulin-binding Proteins AT2G36910 32.400 4.74e-30 126