Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14510g00003 ATGGAGGAATACGCTAATAATAATCACCTGAGCGAAAACACAGGTCCAAGTCCAAGCCCAAGGCCAAATTTCTTGTACTCTTCAGCCAGTGGTGGTGGAAACCACCATCATCATCAGCAGCACCAGCATCAGCATCAGCATCATCAACATAGCCATCACCACCACCACCATCAGTTTCCTATCAACACCTTCCATCTTCAATCGAGTGGATCAGATCATTGCTTTCAGTCTGATCAAGTGGCGCCACAACACCCTTCTGTGAAAACCGAAGCCAGCACTTCTCAGCTTCACGCTCCGATTTTCCACTACCCTTTAATGAGAGGAAATCTTCACAACACTATGCATCATCCTCAGCAACAAGGAGGGAGCCCAACAAGCTCCACCACCGAAGTTGAAGCCATAAAAGCTAAAATCATTGCTCACCCTCAGTACTCCAATCTTTTAGAGGCTTACATGGATTGCCAAAAGATAGGAGCTCCACCGGAAGTGGTGGCGCGTATGGTTGCTGCCAAGCAAGAGTTTGAGGCACGGCAACGATCTTCCCTTGGTTCAAGGGAAAGTTCAAAAGACCCTGAACTTGACCAATTCATGGAAGCTTACTATGACATGCTTGTGAAGTATAGAGAGGAATTAACAAGGCCTATTCAAGAGGCAATGGATTTCATGCGAAGGATAGAAACTCAGCTAAATATGCTATGCAATGGACCCGTGCGGATCTTCTCTGATGATAAATGTGAAGGCGTTGGTTCATCGGAAGAGGATCAAGACAATAGTGGAGGAGAAACGGAACTTCCAGAGATTGATCCTCGAGCAGAAGACCGTGAACTTAAAAACCACTTGCTGAAGAAGTACAGTGGCTACTTAAGTAGCCTTAAGCAAGAACTTTCGAAGAAGAAAAAGAAAGGGAAACTGCCCAAAGATGCTAGGCAAAAGCTACTCAACTGGTGGGAATTACATTACAAATGGCCATATCCTTCGGAATCAGAGAAGGTGGCATTGGCTGAATCAACTGGTTTGGACCAAAAGCAAATAAATAACTGGTTCATAAACCAAAGGAAGAGGCATTGGAAACCATCTGAAGACATGCAATTTATGGTAATGGATGGCCTGCATCCGCAAAGCGCAACTCTCTATATGGATGGTCACTACATGGCTGATGGTCACTACCGTCTAGGACCATGA 1182 0.4526 MEEYANNNHLSENTGPSPSPRPNFLYSSASGGGNHHHHQQHQHQHQHHQHSHHHHHHQFPINTFHLQSSGSDHCFQSDQVAPQHPSVKTEASTSQLHAPIFHYPLMRGNLHNTMHHPQQQGGSPTSSTTEVEAIKAKIIAHPQYSNLLEAYMDCQKIGAPPEVVARMVAAKQEFEARQRSSLGSRESSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLCNGPVRIFSDDKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSATLYMDGHYMADGHYRLGP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14510g00003 393 CDD homeodomain 307 359 IPR001356 GO:0003677
Mupr14510g00003 393 Pfam Homeobox KN domain 315 354 IPR008422 GO:0003677|GO:0006355
Mupr14510g00003 393 SUPERFAMILY Homeodomain-like 296 371 IPR009057 -
Mupr14510g00003 393 Pfam KNOX1 domain 133 175 IPR005540 GO:0003677|GO:0005634
Mupr14510g00003 393 SMART ELK_2 275 296 IPR005539 GO:0003677
Mupr14510g00003 393 ProSiteProfiles ELK domain profile. 275 295 IPR005539 GO:0003677
Mupr14510g00003 393 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 36 365 - -
Mupr14510g00003 393 MobiDBLite consensus disorder prediction 1 58 - -
Mupr14510g00003 393 Pfam KNOX2 domain 188 233 IPR005541 GO:0003677|GO:0005634
Mupr14510g00003 393 FunFam Homeobox protein knotted-1-like 2 300 362 - -
Mupr14510g00003 393 ProSiteProfiles 'Homeobox' domain profile. 295 358 IPR001356 GO:0003677
Mupr14510g00003 393 SMART KNOX1_2 132 176 IPR005540 GO:0003677|GO:0005634
Mupr14510g00003 393 MobiDBLite consensus disorder prediction 36 58 - -
Mupr14510g00003 393 ProSitePatterns 'Homeobox' domain signature. 333 356 IPR017970 GO:0000981|GO:0006355
Mupr14510g00003 393 SMART KNOX2_2 183 234 IPR005541 GO:0003677|GO:0005634
Mupr14510g00003 393 SMART HOX_1 297 362 IPR001356 GO:0003677
Mupr14510g00003 393 Pfam ELK domain 275 296 IPR005539 GO:0003677
Mupr14510g00003 393 MobiDBLite consensus disorder prediction 244 271 - -
Mupr14510g00003 393 MobiDBLite consensus disorder prediction 1 35 - -
Mupr14510g00003 393 Gene3D - 300 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14510g00003 Mupr-Chr14510 7819 14144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14510g00003 71 393 Homeobox Transcription Factor Family AT4G08150 71.903 1.90e-159 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mupr14510g00003 KNOX2 4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14510g00003 - - gmx:100807602 708.368