Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1449g00003 ATGAACGGCGGCGGTGCCACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAACTCACCGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCCTGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCCCTTCTCGAACCTTCCGACGACGATTCCCTTCCTCCTCCCGCCATGCACCACCACCCGCCTCCACCTCCACCTCAAGCCAATTTGAATCAACCTCCACCTAAGGCACCGCCTCCTGAAGAACCAGCTTTTCATGCTGCCGAGGACATTCAGAAATCTGCCTCTTCTGGGGATAAACCTACGGAAACTAATGACACCAACACCAACACCAACGTTGCTAGCCCCAGAGGGTGTGCAACTAGTGGATCATTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACGAGAAATCATGAAGCTTGCAGCGACTCAGGATGATCCTTCAAGTGGAAATGCAGCAGTTTGGACTTCTCCTTGCCACTTACCAATGGACAAGGATGTCCTCATCCACGTTGATACAACAATCCATCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCAATACAGAGAGAAAGTGAGCATAGTTCGTGATGCTGAGGGTCAGGCAAGCAGAAAAGTGTCATTGCAGCGATATCTTGAAAAACGTAAAGACAGGGCAAGATTGAAAGGCAAGAAATTGACTGGGATAACTTCATCTAACTTAGAGATGTATTTGAACCTTCCAGTGAAGGTTCATGCCTCAAATGGGAATTCAAGCCGTAGTAGTACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCAGTGGTTCAGCTGACAACCAGCTAAAAGTTGGCCTTCCCATTGATCTCAATGACAAAGAGCCAGGAGCAGCCATTTTCCTAGGAATATATGATATGATAAATGTGTCATGCTATAATGTCATCCTTCTTCGAATTGACTGGAGAAATACTAGTTAA 1068 0.4747 MNGGGATATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDDDSLPPPAMHHHPPPPPPQANLNQPPPKAPPPEEPAFHAAEDIQKSASSGDKPTETNDTNTNTNVASPRGCATSGSFGQMTIFYCGKVNVYDGVSPDKAREIMKLAATQDDPSSGNAAVWTSPCHLPMDKDVLIHVDTTIHQVAQADKMMEYPLQYREKVSIVRDAEGQASRKVSLQRYLEKRKDRARLKGKKLTGITSSNLEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLVSSGSADNQLKVGLPIDLNDKEPGAAIFLGIYDMINVSCYNVILLRIDWRNTS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1449g00003 355 MobiDBLite consensus disorder prediction 65 139 - -
Mupr1449g00003 355 Pfam tify domain 147 175 IPR010399 -
Mupr1449g00003 355 MobiDBLite consensus disorder prediction 283 306 - -
Mupr1449g00003 355 SMART tify_2 141 176 IPR010399 -
Mupr1449g00003 355 MobiDBLite consensus disorder prediction 115 139 - -
Mupr1449g00003 355 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 11 271 IPR040390 -
Mupr1449g00003 355 Pfam Jas motif 237 255 IPR018467 -
Mupr1449g00003 355 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Mupr1449g00003 355 MobiDBLite consensus disorder prediction 76 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1449g00003 Mupr-Chr1449 11790 17570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1449g00003 6 283 Tify Gene Family AT4G14720 46.233 1.73e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mupr1449g00003 tify 9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1449g00003 - - gmx:100808970 480.715