LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14496g00001	ATGAACAACTTTGGGAAAGAGGCTACATTGCCATTGAATCTCAACATTAAGGACAAACATCTACTCCAATCCAACGATGCCTTCAAATCTCCATTATCTCCCAAGCAACCTTTTTTCATTGGTGTTGCTGGTGGAACTGCATCTGGGAAAACAACTGTATGTAACATGATAAATACACAACTTCGAGATCATCGTGTTGTTCTCATTACTCAAGACTCATTTTATTACTCATTGAGTGACAATATGGTACCGAAAGTTAATGAGTACAATTTTGATCATCCTGACGCCTTTGATACGAAGCTTTTGCTTTCAACAATGGAGAAATTAAAATGTGGACGATCGGTTACTGTACCGGATTATGATTTCAACACCCATAAGAGAATCGAACCTGGACGTCAGGTGCATCCTGCAGATATCATAATTTTAGAAGGGATATTAGTTCTTCATGATTCTGGTGTCCGTAATATTTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGCCTTGCACGAAGGATGCAACGTCTTGTTATCGAGCGTGGGAGGAATATTGAGAATGTTTTAGACCAATATTCCAGATTTGTAAAGCCTAGTTTTGAAGATTTCGTACTGCCAACTAAAAAGTATGCTGATATTATCATCCCATCTGGAGGAGATAATGATGTTGCCATTGACTTAATATTACAGAACATACAACATAGGATAATGATGATGACGAAGAATTGTGCTTGTACTCAGATAAAGGGAATGCATACTCTTATTCGCGATGTTAAGGCAACAAAGCATGACTTTGTCTTTTACTCAGATCGTCTTATTAGACTGGTTGTCGAGCATGGATTGGGTCACCTTCCTTTTTCTGAAAAGCAGGTGATAACACCAACAGGATCTGTATACTCTGGTGTAATTTTCTGTAGCAGGCTGTGTGGAGTATCAGTCATTAGAAGTGGAGAAAGCATGGAAAACGCATTAAGAGAATGCTGTAATGGAATCAAGATTGGTAAAATCCTTATTCATGGACATGGTACGAATGGTCGACAGTTAATCTATGAGAAACTACCATCAGACATTGCAAGTCGTCATGTATTGCTACTCGATCCAGTTTTGGCCACAGGAAGTTCTGCAGTAAAAGCTATTTCTCTACTTCTCAACAAAGGTGTACCAGAATCTAACATTATATTTCTAAATTTAGTAGCTGTGAGTCACTTTGATTTGTTGCTTCCTTATCTTGCACCACAAGGAATAAATGCAGTTTGTGAGAGATTTCCAATGATAAAACTTGTGACATCAGAGATTGATGAATCATTGAATGAGAATGCTCATGTGATCCCTGGCTTAGGGGAGTTTGGTGATCGTTACTTTGCCACTGATGATTAG	1380	0.3833	MNNFGKEATLPLNLNIKDKHLLQSNDAFKSPLSPKQPFFIGVAGGTASGKTTVCNMINTQLRDHRVVLITQDSFYYSLSDNMVPKVNEYNFDHPDAFDTKLLLSTMEKLKCGRSVTVPDYDFNTHKRIEPGRQVHPADIIILEGILVLHDSGVRNILNMKIFVDEDSDVRLARRMQRLVIERGRNIENVLDQYSRFVKPSFEDFVLPTKKYADIIIPSGGDNDVAIDLILQNIQHRIMMMTKNCACTQIKGMHTLIRDVKATKHDFVFYSDRLIRLVVEHGLGHLPFSEKQVITPTGSVYSGVIFCSRLCGVSVIRSGESMENALRECCNGIKIGKILIHGHGTNGRQLIYEKLPSDIASRHVLLLDPVLATGSSAVKAISLLLNKGVPESNIIFLNLVAVSHFDLLLPYLAPQGINAVCERFPMIKLVTSEIDESLNENAHVIPGLGEFGDRYFATDD	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14496g00001	459	Pfam	Phosphoribulokinase / Uridine kinase family	39	225	IPR006083	GO:0005524\|GO:0016301
	Mupr14496g00001	459	Gene3D	-	35	242	IPR027417	-
	Mupr14496g00001	459	PRINTS	Uridine kinase signature	37	54	-	-
	Mupr14496g00001	459	PRINTS	Uridine kinase signature	112	127	-	-
	Mupr14496g00001	459	PRINTS	Uridine kinase signature	182	193	-	-
	Mupr14496g00001	459	PRINTS	Uridine kinase signature	204	217	-	-
	Mupr14496g00001	459	PRINTS	Uridine kinase signature	168	178	-	-
	Mupr14496g00001	459	PRINTS	Uridine kinase signature	67	78	-	-
	Mupr14496g00001	459	SUPERFAMILY	PRTase-like	248	455	IPR029057	-
	Mupr14496g00001	459	CDD	PRTases_typeI	309	403	IPR000836	-
	Mupr14496g00001	459	Pfam	Uracil phosphoribosyltransferase	248	457	-	-
	Mupr14496g00001	459	Gene3D	-	243	458	IPR029057	-
	Mupr14496g00001	459	FunFam	Probable uracil phosphoribosyltransferase	230	457	-	-
	Mupr14496g00001	459	NCBIfam	uridine kinase	38	236	IPR000764	-
	Mupr14496g00001	459	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	31	229	IPR027417	-
	Mupr14496g00001	459	CDD	UMPK	39	235	IPR000764	-
	Mupr14496g00001	459	FunFam	Uridine kinase	33	239	-	-
	Mupr14496g00001	459	PANTHER	URIDINE KINASE	31	357	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14496g00001	Mupr-Chr14496	751	9315	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14496g00001	31	459	PRT Gene Family	AT5G40870	66.059	0.0	591

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14496g00001	K00876		-	gmx:100803453	680.633