Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14489g00001 ATGAGGCAAACAACCTCTTCCGAAACAACAAGCAGCAGCTCCACCTCCTCCTCCTCTTCTGCATGTTCTCCAAAAGTCCAAGCCCAGGCCCAAAAGGAGAGCAAGAGGCCCAGCAAGCACCCGGTGTACCACGGCGTGCGAAAGAGAAACTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCGCGCAAGAAATCCCGCATCTGGCTCGGAACCTTCGCCACCCCAGAAATGGCGGCGCGAGCCCACGACGTGGCAGCTCTCACCATCAAGGGCCAGACAGCCATTCTGAACTTCCCCGAAATCGCGGACCTTCTCCCCCGACCAGTCACGTGTTCCCCACGTGACATCCAAGCCGCGGCCACAGAAGCAGCTTCCATGGTTAAATTCGACCCCGTAGTAGTACAATCCTCGGATTCGGAGTCTTCGGAGCTGAGCGAGATTGTTGAGCTTCCCAACATTGAAGACAGCTTTGACTCCGTCGACTCCTCCGAGTTCGCGTTGCTTGACGTTGTCGACAGCTGGGTGTTTCCGCCAATGGGGTCAGAGGGAATCGAGTTCTGCGCCGCTTTTTCTGATGAGTTAGAGTTATTTCCTCAACAGAGTTTTATCAACTCTGAGTCCGAGATAGAGATGGAGATGGAGATTCCCATTTGGGATTGA 660 0.55 MRQTTSSETTSSSSTSSSSSACSPKVQAQAQKESKRPSKHPVYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALTIKGQTAILNFPEIADLLPRPVTCSPRDIQAAATEAASMVKFDPVVVQSSDSESSELSEIVELPNIEDSFDSVDSSEFALLDVVDSWVFPPMGSEGIEFCAAFSDELELFPQQSFINSESEIEMEMEIPIWD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14489g00001 219 MobiDBLite consensus disorder prediction 1 31 - -
Mupr14489g00001 219 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Mupr14489g00001 219 CDD AP2 43 100 IPR001471 GO:0003700|GO:0006355
Mupr14489g00001 219 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Mupr14489g00001 219 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Mupr14489g00001 219 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Mupr14489g00001 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 157 - -
Mupr14489g00001 219 MobiDBLite consensus disorder prediction 1 45 - -
Mupr14489g00001 219 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Mupr14489g00001 219 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Mupr14489g00001 219 Gene3D AP2/ERF domain 42 101 IPR036955 GO:0003700|GO:0006355
Mupr14489g00001 219 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mupr14489g00001 219 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14489g00001 Mupr-Chr14489 4877 5536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14489g00001 16 178 AP2-EREBP Transcription Factor Family AT5G11590 55.208 1.51e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr14489g00001 AP2 4.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14489g00001 - K09286 gmx:100801780 287.345