Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14486g00001 ATGGGAAGCAAGTGGAAGAAAGCCAAGGTGGCGCTCGGTCTCAATCTCTGCATGTTTGTCCCCAGAACCTTGGACGACGATTCGCCGCCGCACACGGTGGTTTCCGAGCGCTTGTCGGACGCCGCTCTGCTCTCGCCAGCCAACTGGGACACCACCTCTTCCCGGCCAACCACGCCGGTGCCGTCGTTTCACGGCTTGAAGCTCTCAAAAAGTAGCAGCAAATCCTCTAAGCAAACCTGCTCAATATGCTTAACCAAAATGAAGCAAGGATCTGGCCATGCTATATTCACCGCAGAATGTTCACATTCCTTCCATTTCCACTGCATTGCTTCAAATGTGAAACATGGAAACCAAATATGTCCGGTGTGCAGAGCAAAATGGAAGGAAATACCATTATCCGGTCCCAGTTTGGATCCTATCCCCGGTAGAGTATCACCAAGTCCAATCAATTGGCCCCAAAATGATGCTTTGATGGCAGTTGTCCACCGCCTACCTCATCCCCACCGAGATTTGAATAGGAGGCATGTTGTGCCACTTTATCAGGCTTCCGAGCCAGGCATATTTGACGATGACGAATCCTTGAATCATCAACATGCATTTTCTGAGAGAAGCACCTGCAATAGGAATACTGAAGATACTACTGATACTGCTGGAGCAATGGAGATTAAAATGTTTCCCGAAGTATCTGCTGCTCCAGGATCCAAGACTTATTCTAACTTCACGGTTTTGGTTCATCTCAAAGCTACTGCTGTTGCAGCAGCAGCTGCAGCCAAAAGACAAGGTCTGAGTAGAAACCAGGCTAACTTGGCACAGATTTCTCAGACTCCTCGTGCCCCTGTCGACTTGGTCACAGTGCTTGATATCAGTGGTAGCATGGCTGGAACTAAGCTTGCACTACTAAAAAGAGCTATGGGATTTGTCATACAGAACCTTGGCTCTAACGACCGGCTCTCTGTTATTGCTTTCTCTTCCACAGCTCGCCGCCTCTTTCCCTTGTGCAGGATGACTGATTCTGGCCGGCAGCAGGCATTGCAAGCTGTTAATTCTTTGGTTGCAAATGGTGGTACTAATATTGCAGAAGGGCTGAGGAAAGGTGCTAAGATAATGGAAGATCGAAAGGAAAAGAATCCAGTTGCCAGTATTATACTGCTGTCCGATGGTCAAGATAATTACACCGTCAATGGCTCTGGAACTAACCTGCCTCAACAAAATTACCAGTTTCTTCTGCCCACCTCCATCAGTGGTTGTGATAATTCAGGATTTCAAATTCCTGTGCATGCTTTTGGATTTGGTGCAGATCATGATGCATCACTGATGCACTCAATTTCAGAGACTTCTGGTGGCACATTTTCTTTCATTGAGACTGAGGCTGTGTTACAGGATGCGTTTGCACAATGTATTGGAGGACTTCTGAGTGTTGTTGTACAGGAGCTGCAAGTGGGAATTGAGTGTGTACACCCAAATCTTAATCTTGTCTCGCTCAAAGCAGGAAGTTACCCTAGCCGTTTGATGGCTGATGGATGCCAAGGTTCAATTGATGTTGGAGACCTGTATGCAGATGAGGAGAGGGATTTTCTAGTTTCAGTTAATGTCCCTGCCACTTCTGCGAATGAAACATCATTGATAAAAGTCAAATGTGTGTACAAGGATCCCTTAACTCAGGAAACAGCAACATTGGAAAGTGAGGAAGTTAAGATTGAGCGGACTGAAATTGCCGGGCAGGTTGTAATGTCACTTGAAGTGGACAGACAGCGCAACAGGCTCCAAGCAGCTGAGGCAATGGCCCAGGCAAGGGTTGCAGCTGAGCAGGGAGACCTAACTGGAGCAGTATTCATCCTTGAAAACTGTAGAAAAATTCTCTCAGAGACTGTTTCTGCCAAATCTCATGACCGCCTTTGTGTTGCATTGGATGCTGAACTGAAGGAAATGCAAGAGCGGATGGCGAGTAGGCACGTGTATGAAGCATCTGGGAGAGCATATATACTTTCTGGATTGAGTTCACACTCATGGCAAAGAGCAACAGCAAGAGGTGATTCCACTGATAGGTCAAGTCTTGTTCAGGCGTATCAGACACCATCAATGGCTGAGATGCTTACTCGATCTCAGGCCATGTTACTAGGTAGTCCATCAGGGCAGAGGCTTCTCCAGCCACTCTTGTCATTCAGATCACAACCTAGCCCAAGGTTGTCTATGGTCCCTTTTCACGATTTTGCACCCACTTCGGTTTTCAAGGCTAACAATTAG 2244 0.4706 MGSKWKKAKVALGLNLCMFVPRTLDDDSPPHTVVSERLSDAALLSPANWDTTSSRPTTPVPSFHGLKLSKSSSKSSKQTCSICLTKMKQGSGHAIFTAECSHSFHFHCIASNVKHGNQICPVCRAKWKEIPLSGPSLDPIPGRVSPSPINWPQNDALMAVVHRLPHPHRDLNRRHVVPLYQASEPGIFDDDESLNHQHAFSERSTCNRNTEDTTDTAGAMEIKMFPEVSAAPGSKTYSNFTVLVHLKATAVAAAAAAKRQGLSRNQANLAQISQTPRAPVDLVTVLDISGSMAGTKLALLKRAMGFVIQNLGSNDRLSVIAFSSTARRLFPLCRMTDSGRQQALQAVNSLVANGGTNIAEGLRKGAKIMEDRKEKNPVASIILLSDGQDNYTVNGSGTNLPQQNYQFLLPTSISGCDNSGFQIPVHAFGFGADHDASLMHSISETSGGTFSFIETEAVLQDAFAQCIGGLLSVVVQELQVGIECVHPNLNLVSLKAGSYPSRLMADGCQGSIDVGDLYADEERDFLVSVNVPATSANETSLIKVKCVYKDPLTQETATLESEEVKIERTEIAGQVVMSLEVDRQRNRLQAAEAMAQARVAAEQGDLTGAVFILENCRKILSETVSAKSHDRLCVALDAELKEMQERMASRHVYEASGRAYILSGLSSHSWQRATARGDSTDRSSLVQAYQTPSMAEMLTRSQAMLLGSPSGQRLLQPLLSFRSQPSPRLSMVPFHDFAPTSVFKANN 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14486g00001 747 ProSiteProfiles VWFA domain profile. 281 467 IPR002035 -
Mupr14486g00001 747 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 78 702 - -
Mupr14486g00001 747 SMART ring_2 80 123 IPR001841 -
Mupr14486g00001 747 Pfam von Willebrand factor type A domain 281 464 IPR002035 -
Mupr14486g00001 747 ProSiteProfiles Zinc finger RING-type profile. 80 124 IPR001841 -
Mupr14486g00001 747 SUPERFAMILY vWA-like 276 467 IPR036465 -
Mupr14486g00001 747 CDD RING-H2_WAVH2 78 129 - -
Mupr14486g00001 747 SMART VWA_4 279 466 IPR002035 -
Mupr14486g00001 747 Coils Coil 626 646 - -
Mupr14486g00001 747 Gene3D von Willebrand factor, type A domain 281 468 IPR036465 -
Mupr14486g00001 747 SUPERFAMILY RING/U-box 76 130 - -
Mupr14486g00001 747 CDD vWA_C3HC4_type 280 454 - -
Mupr14486g00001 747 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 131 IPR013083 -
Mupr14486g00001 747 Pfam Ring finger domain 79 124 IPR001841 -
Mupr14486g00001 747 MobiDBLite consensus disorder prediction 49 71 - -
Mupr14486g00001 747 Pfam VWA / Hh protein intein-like 630 702 IPR032838 -
Mupr14486g00001 747 Coils Coil 745 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14486g00001 Mupr-Chr14486 3437 8474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14486g00001 55 131 C3H Transcription Factor Family AT2G04240 32.468 8.76e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14486g00001 - - gmx:100818239 1300.8