Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1446g00003 ATGGCTTCCACTGCGGCAGGTGCAACCAATGTCAATGATGCTTTATACAAGGAATTGTGGCATGCCTGTGCTGGACCCCTTGTCACTCTTCCGCGTGAAGGGGAGAGAGTTTATTACTTTCCCCAAGGTCACATGGAACAGCTCGAGGCATCTATGAATCAGGGATTGGAGCAGCAAATGCCTTCCTTTAATCTGCCTTCTAAAATATTATGCAAAGTGGTCAATGTTCATCTTCGAGCTGAACCTGAAACAGATGAAGTATATGCACAAATAACTTTGCTTCCTGAAGCAGATCAAAGCGAGGTGACAAGCCCTGACGATCCTCTGCCCGATCCTCTAAGGTGTACAGTCCATTCATTTTGCAAGACGCTCACTGCTTCTGACACTAGCACTCATGGAGGTTTCTCTGTTCTTCGAAGGCATGCAGATGATTGTCTGCCACCACTGGATATGACTCAGCAGCCACCATGGCAAGAATTGGTTGCAACTGATCTGCATGGGAATGAATGGCATTTTAGACATATTTTTCGAGAGTTGTACTTGGAAAGGTTGACGTATAGGGGTGAAAATGGAGAACTGCGAGTTGGAGTTAGGAGGCTCATGAGACAGCAAAGCAACATGCCATCTTCTGTTATATCCAGTCACAGTATGCATCTGGGTGTTCTGGCCACTGCATCTCATGCCATTGCCACGGGAACGCTGTTTTCTGTATTTTATAAGCCCAGAACAAGCCGGTCTGAGTTTATTGTGAGTGTCAACAAGTATCTTGAAGCTCGAAGTCATAAACTGTCTGTTGGGATGAGATTCAAAATGAGATTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTCAGTGGTACGATTGTGGGTGTTGGAGATAATAAATCGTCTGTCTGGGCTGATTCTGAGTGGCGATCATTAAAGGTTCAATGGGATGAACCATCATCTATTTTGCGTCCTGATAGAGTTTCTCCATGGGAATTGGAGCCACTTGTGTCTACCCCTGCTACAAACTCCCAGCCATCCCAAAGAAACAAGAGATCACGGCCTCCCATTCTACCATCATCGATGCCTGATTCTTCTCTGCAAGGCGTATGGAAATCAACAGTTGAATCTGCACCTTTCTCTTATCGTGACCATCAACATGGACGAGATGTATATCCATCACCCAAATTCAATTCTACTGCAACTAGCTTTATTGGTTTTGGGGGGAATTGCTCTGCTTCCAACAAGTCAATATATTGGTCTAGTAGGATGGAAAACTCTACAGAATCCTTTTCACCTGTAGCACTACAAGAGTCTGGAGAGAAGAGACAAGGGACTGGAAATGGCTGTAGGCTCTTTGGGATTCAGATACTAGAGAATTCTAATGCAGAAGAAAGTATACCAACGGTCACTTTGTCAGGAAGGGTGGGTGATGAGGGCCCCCTTCCATCTTTGGATGCTGAGTCTGACCAGCATTCTGAACCATCAAATGTTAATCGATCTGATATTCCTTCGGTAAGCTGTGATGCTGAAAAATCATGCCTGCGGTCTCCCCAGGAGTCACAGAGCAGGCAAATAAGAAGCTGCACGAAGGTTCACATGCAAGGTATGGCTGTTGGAAGGGCTGTGGATTTAACACGGTTTGATGGGTATGAGGATCTGCTTAGGAAATTGGAAGAGATGTTTGACATCAAGGGTGAACTATGTGGATCCACAAAAAAATGGCAGGTTGTGTACACTGATAATGAAGATGATATGATGATGGTTGGGGATGATCCATGGCTTGAATTTTGTAGCATTGTGAGGAAAATTTTCATCTACACTGCAGAGGAGGTGAAGAAGCTTTCACCCAAAATAGGACTTCCTATCAATGAAGAAGTTAAACCTAGCAAAATGGATTCAGAAGCAGTAGTCAATCCCGAGGACCAGTCATCTATTGTGGGGCCTGGTTGTTGA 1938 0.4474 MASTAAGATNVNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPDPLRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRELYLERLTYRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPATNSQPSQRNKRSRPPILPSSMPDSSLQGVWKSTVESAPFSYRDHQHGRDVYPSPKFNSTATSFIGFGGNCSASNKSIYWSSRMENSTESFSPVALQESGEKRQGTGNGCRLFGIQILENSNAEESIPTVTLSGRVGDEGPLPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIKGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVKKLSPKIGLPINEEVKPSKMDSEAVVNPEDQSSIVGPGC 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1446g00003 645 MobiDBLite consensus disorder prediction 624 645 - -
Mupr1446g00003 645 Pfam Auxin response factor 225 307 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr1446g00003 645 MobiDBLite consensus disorder prediction 466 498 - -
Mupr1446g00003 645 SUPERFAMILY DNA-binding pseudobarrel domain 113 228 IPR015300 -
Mupr1446g00003 645 FunFam Auxin response factor 516 610 - -
Mupr1446g00003 645 Gene3D - 262 335 - -
Mupr1446g00003 645 Gene3D - 516 610 - -
Mupr1446g00003 645 MobiDBLite consensus disorder prediction 331 363 - -
Mupr1446g00003 645 SUPERFAMILY CAD & PB1 domains 523 598 - -
Mupr1446g00003 645 Pfam AUX/IAA family 518 611 IPR033389 -
Mupr1446g00003 645 FunFam Auxin response factor 262 334 - -
Mupr1446g00003 645 ProSiteProfiles PB1 domain profile. 521 614 IPR000270 GO:0005515
Mupr1446g00003 645 MobiDBLite consensus disorder prediction 483 498 - -
Mupr1446g00003 645 Gene3D - 117 185 IPR015300 -
Mupr1446g00003 645 CDD B3_DNA 118 199 IPR003340 GO:0003677
Mupr1446g00003 645 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 14 610 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1446g00003 Mupr-Chr1446 14024 19228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1446g00003 11 639 B3 DNA Binding Superfamily AT1G59750 68.244 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1446g00003 K14486 - gmx:100793224 1211.05