Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1445g00002 ATGGAACAGCTTGAGGCGTCTATGTATGAGGGATTAGAGCAGCAGATGCCTTGCTTCAATCTACCTTCTAAAATATTATGTAAAGTGGTCAATATTCATCTTCGGGCTGAACCTGAAACAGATGAAGTATATGCACAGATAACCTTGCTTCCTGAAGCAGATCAAAGTGAGGTGACCAGCCCTGATGATCCTCTGCCTGAATCTCCGAGGGTCAAGGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACCAGTACCCATGGAGGTTTCTCAGTTCTTCGAAGACACGCAGACGATTGTTTGCCTCCACTGGATATGTCTCAACAGCCACCATGGCAAGAATTGGTTGCAACTGATTTACACGGGAATGAATGGCATTTTAGACATATTTTTCGAGGGCAACCCAGGCGCCACTTACTTACCACTGGGGGTGAAAATGGAGAGCTGCGAGTTGGGGTTAGGAGGCTCATGAGGCAGCAAAGCAATGTGCCTTCTTCTGTTATATCTAGTCACAGTATGCATCTTGGTGTTCTGGCCACTGCATCTCATGCCATTGCCACTGGAACACTGTTTTCTGTGTTTTACAAGCCCAGAACAAGCCGGTCAGAGTTTATTGTGAGTGTCAACAAGTATCTGGAAGCTCAGAGTCATAAACTCTCTGTTGGGATGAGATTCAAAATGAGATTTGAGGGTGACGAGATTCCCGAAAGAAGGTTCAGTGGCACAATTGTGGGCGTTGGAGATAATAAATCATTGGTTTGGCCTGATTCGGAGTGGCGATCATTAAAGGTGCAATGGGATGAACCATCATCAATTTTGCGTCCTGATAGAGTTTCTTCATGGGAGTTGGAGCCACTTGTGTCTACTACTCCTGCAAACTCACAGCCAACCCAAAGAAACAAGAGGGCACGGCCTCTCATTCTACCTTCTACAATGCCTGATTCTTCTATGCAAGGCATATGGAAATCACCAGTTGAATCTACATCTTTCTCTTATTGTGACCCCCAACTTGGACGTGGCTTCTATCCATCACCCAAGTTCAATTCTTCTGCAACTAACTTTCTTGGTTTTGGGAATAGCTCTGTGGGACCTCCTTCCAACAAATCAATATATTGGTCTAATAGGATGCAAAATTCCATGGAATCTATTTCAGCTATAGCCCATAAAGATGCTGGAGAGAAGAGACAAGGCACTGGAAATGGCTGTAGACTCTTTGGGATTCAGATACTTGAGAATTCTAATGCAGAAGGAAATCTACAAACAGTCACTTTGTCAGGAAGGGTGGGTGATGATAGGTCTGTTCCATCTTTAGATGCCGAGTCTGATCAGCATTCTGAACCATCAAATGCCAATCGATCTGATATTCCTTCAGTAAGTTGTGATGCTGAAAAATCATGCCTGCAGTCTCCCCAGGAGTCACAAAGCAAGCAAATAAGGAGCTGTACAAAGGTTCACATGCAAGGAATGGCTGTTGGGAGGGCTGTGGATTTAACACGATTTGATGGATATGAGGATTTGCTTAGGAAATTCGAAGAGATGTTTGACATCAAGGCTGAGCTCTGTGGGTCCCAAAAAAAATGGCAGGTTGTCTACACTGATAATGAAGATGATATGATGATGGTTGGAGATTATCCATGGGATGAGTTCTGCACTGTTGTGAGGAAAATTTTCATCTACACGGCAGAGGAGGTGAAGAAGCTTTCGCCCAAAATAGGACTCCCAATCAATGAAAATTTTAAAGCAAGCAAGCTGGATTCTGAAACAATAGTGAATCCTGAGGACCAGTCGTTTAATGTGGGGCCCAGTTGC 1812 0.4415 MEQLEASMYEGLEQQMPCFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRVKVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGGENGELRVGVRRLMRQQSNVPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSLVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTPANSQPTQRNKRARPLILPSTMPDSSMQGIWKSPVESTSFSYCDPQLGRGFYPSPKFNSSATNFLGFGNSSVGPPSNKSIYWSNRMQNSMESISAIAHKDAGEKRQGTGNGCRLFGIQILENSNAEGNLQTVTLSGRVGDDRSVPSLDAESDQHSEPSNANRSDIPSVSCDAEKSCLQSPQESQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKFEEMFDIKAELCGSQKKWQVVYTDNEDDMMMVGDYPWDEFCTVVRKIFIYTAEEVKKLSPKIGLPINENFKASKLDSETIVNPEDQSFNVGPSC 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1445g00002 604 CDD B3_DNA 74 156 IPR003340 GO:0003677
Mupr1445g00002 604 MobiDBLite consensus disorder prediction 427 458 - -
Mupr1445g00002 604 Pfam AUX/IAA family 472 524 IPR033389 -
Mupr1445g00002 604 Pfam AUX/IAA family 527 570 IPR033389 -
Mupr1445g00002 604 Gene3D - 219 292 - -
Mupr1445g00002 604 FunFam Auxin response factor 219 291 - -
Mupr1445g00002 604 SUPERFAMILY DNA-binding pseudobarrel domain 72 185 IPR015300 -
Mupr1445g00002 604 SUPERFAMILY CAD & PB1 domains 482 557 - -
Mupr1445g00002 604 Gene3D - 73 147 IPR015300 -
Mupr1445g00002 604 MobiDBLite consensus disorder prediction 441 458 - -
Mupr1445g00002 604 Pfam B3 DNA binding domain 76 144 IPR003340 GO:0003677
Mupr1445g00002 604 Pfam Auxin response factor 182 264 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr1445g00002 604 FunFam Auxin response factor 475 569 - -
Mupr1445g00002 604 SMART B3_2 76 173 IPR003340 GO:0003677
Mupr1445g00002 604 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 569 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr1445g00002 604 Gene3D - 475 569 - -
Mupr1445g00002 604 ProSiteProfiles PB1 domain profile. 480 573 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1445g00002 Mupr-Chr1445 2908 10393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1445g00002 1 597 B3 DNA Binding Superfamily AT1G59750 66.397 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr1445g00002 AUX_IAA 1.9e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1445g00002 K14486 - gmx:100815450 1121.3