Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14454g00001 ATGGCGTACCACAACCACAACCTCGGACAACAAGCCTTCCCACTCCACCATTTCCCGAACCAATCCATATTACCGGACCAACAGCAACTGTCCTCCTCGCCCGACCCTACCTCCAAACCTCCCTCCGATCCACACCCTCTCCAAACCGCACCCAATTGGCTCAACGACGCCCTCCTCCGCACTCACTACACCGGCACCAACAACGACAACGACACTACCGCCACTAACAACAACGTTAACTCCAACAACAGTGCTTCCAATTTCCTGAACCTCAACCCTGGCTCCGACGCTCGGTGGCTGGCGCGACCGGTTCTCCACCGCAACCCTGGCGAAGTCATCGACGCCGGCGGCGAGTCCCTGGTGGAAGGTGGCGATTTGAAGGAGGGCGACGCCGTGAACTGGCAGATTGGGCGGTGGAAGGCGGAGATTCTGGCGCACCCGCTGTACGAACAGCTGCTGTCGGCACACGTGGCGTGCCTCCGGATCGCCACGCCGGTGGACCAGTTGCCGAGGATCGACGCGCAGTTGGCGCAGTCGCAGAACGTGGTCGCCAAGTACACCGCCTTCGGACACAATGCCGCGGACGACAAAGAACTCGACCACTTCATGTCGCACTATGTTTTGTTGCTCTGTTCCTTCAAAGAGCAATTGCAACAACATGTCCGGGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATAGAGCAATCCTTGCAGAGTCTAACAGGAGTTTCACCTGGAGAAGGTACAGGGGCAACAATGTCTGATGATGAAGATGAGCAAGTAGATAGTGATGCCAATCTCTTTGATAGTAGTTTGGATGGGGCAGATAGCATGGGATTTGGCCCTCTTGTTCCTACAGAGAGTGAGAGGTCCCTCATGGAGCGTGTAAGACAAGAACTAAAGCATGAGCTGAAACATGATTATAAGGAGAAAATTGTAGACATAAGAGAGGAAATTTTGCGCAAGAGACGAGCCGGGAAACTTCCTGGTGACACAACCTCTGTGCTTAAATCTTGGTGGCAATCACATTCCAAGTGGCCTTACCCTACAGAGGAGGATAAGGCAAGGTTGGTGCACGAAACTGGGTTGCAATTAAAGCAGATTAATAATTGGTTTATCAATCAAAGGAAGAGGAATTGGCACAACAATGCTTCAACTTCTACTGTCTTGAAGAGCAAGCGCAAAAGGTGTTTAGATCACATTGTAGTTCGGGTGCTTGTGGACAATGGTTCTTCATTGAATGCTATGTCGAAATCTATACTAGAAAATTTTCCTTGTGACGAGACCTAA 1296 0.5147 MAYHNHNLGQQAFPLHHFPNQSILPDQQQLSSSPDPTSKPPSDPHPLQTAPNWLNDALLRTHYTGTNNDNDTTATNNNVNSNNSASNFLNLNPGSDARWLARPVLHRNPGEVIDAGGESLVEGGDLKEGDAVNWQIGRWKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYTAFGHNAADDKELDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEDEQVDSDANLFDSSLDGADSMGFGPLVPTESERSLMERVRQELKHELKHDYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVHETGLQLKQINNWFINQRKRNWHNNASTSTVLKSKRKRCLDHIVVRVLVDNGSSLNAMSKSILENFPCDET 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14454g00001 431 SUPERFAMILY Homeodomain-like 323 386 IPR009057 -
Mupr14454g00001 431 SMART HOX_1 323 388 IPR001356 GO:0003677
Mupr14454g00001 431 MobiDBLite consensus disorder prediction 59 84 - -
Mupr14454g00001 431 FunFam homeobox protein knotted-1-like 3 isoform X1 322 383 - -
Mupr14454g00001 431 ProSiteProfiles 'Homeobox' domain profile. 321 384 IPR001356 GO:0003677
Mupr14454g00001 431 Pfam KNOX2 domain 194 243 IPR005541 GO:0003677|GO:0005634
Mupr14454g00001 431 Pfam Homeobox KN domain 341 380 IPR008422 GO:0003677|GO:0006355
Mupr14454g00001 431 CDD homeodomain 324 385 IPR001356 GO:0003677
Mupr14454g00001 431 Pfam KNOX1 domain 140 180 IPR005540 GO:0003677|GO:0005634
Mupr14454g00001 431 Gene3D - 320 395 - -
Mupr14454g00001 431 SMART KNOX1_2 137 181 IPR005540 GO:0003677|GO:0005634
Mupr14454g00001 431 SMART KNOX2_2 189 244 IPR005541 GO:0003677|GO:0005634
Mupr14454g00001 431 MobiDBLite consensus disorder prediction 25 84 - -
Mupr14454g00001 431 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 156 383 - -
Mupr14454g00001 431 ProSiteProfiles ELK domain profile. 301 321 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14454g00001 Mupr-Chr14454 6775 11655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14454g00001 51 398 Homeobox Transcription Factor Family AT5G25220 70.370 2.15e-175 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mupr14454g00001 KNOX2 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14454g00001 - - gmx:100784317 665.996