Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14419g00002 ATGGACTTCCCGAAGAAGCGCAAAATGGAAGAGAACGGTGACGCCAATTCTCCGCCGCCGCCATCCTCCGACGCAGGCCCCACAACCACTACCACTCCCCTCACTGCCGAAGACATCCGCAAGATCCTCCAACCCTTCTCCCAGGAACAGTTCCTCGACCTCCTCCAATCCGCCTCGCTCCGCCACCCCGACGTCCTCGACTCCGTCCGCGCCGTCGCGGACCGCGATTCCACCCTCCGGAAGCTCTTCGTGCGCGGCCTCGCCGGCGAGACCACCACCGAGACCCTCCGCGCCGTGTTCTCGGCGTTCGGCGACCTCGACGAGGCCATCGTCATCTTCGACAAGGCCACGGGGCGCTCCAAGGGCTACGGCTTCGTCGTGTTCCGCCACGTGGACGGCGCCATCCTCGCGCTCAAAGAGCCGAGCAAGAAGATCGACGGCCGCATGACGGTCACGCAGCTCGCGGCAGCGGGAGGCCCGGGCGCCGCCGGCGACGTGTCAGCGCGGAAGGTCTTCGTTGGGAACGTGCCGTTCGAGATATCCTCGGAGCGGCTCCTCAGCGAGTTCCTCAAGTTCGGAGAAGTCGAGGAGGGGCCTCTAGGGTTTGATAAATCGAGCGGCAAAACGAGGGGTTTCGCGTTCTTCGTTTATAAGACCGAGGAAGGTGCGAGGGCTTCGTTGGTGGAACCCGTAAAGACCATTGAGGGGAACCAAGTGATTTGCAAATTGGCTGTGGATAACAAAAAGACGAAACCCTTTGGAGGGGATCATCACCAGCAGCAGCAGCATCAACAACAGCATCAACAGCAACATCAGCAGCAACAGGTGCAACAGCTGCAACAGCAAGGTCCTATGCTGGTGTCGCAGTATAGTGGATATGGTGGGAATGGTTATGGGATGCAGCACTCGGTGCCACCTTTTAATAACTCGGTCCAGGTTGCCGGTGGTGGTGTGTATGGCCATGGAATTGGTGCTGGGTATGGTAATTCGCAGCTTGGTGGGCCGGTTTCCGGCGACTATGGTGGGAGGGTGCCTCCAAATTCAGGTGGGGGGTTCCCCGATGGCTCGCAATATGGCTTCCCTCCTTCGTCAGGGCTTCCGTCGCAGCCACCAGTACTAATGCCTAGGCCTCCTCCTGGTGGAATGTGTTTCATTCAGGTTTGTGATGGCTTCTTGGACGCTAATGCTTTAAATGGTTGTGCTGCTTTCGTGCATGCAGACAATGAAATCTTTGGTTTTGGTTACATGGACTGCTGTAATATGTTGCTGCTTCACTACCTCTGCTTCTATAATGCTATCTTGGTGTCGTTTGATGATGCCTTGAGATGTGGAAATTCCGCCATAAATAGTCTCTACTCAAGGTGA 1365 0.5714 MDFPKKRKMEENGDANSPPPPSSDAGPTTTTTPLTAEDIRKILQPFSQEQFLDLLQSASLRHPDVLDSVRAVADRDSTLRKLFVRGLAGETTTETLRAVFSAFGDLDEAIVIFDKATGRSKGYGFVVFRHVDGAILALKEPSKKIDGRMTVTQLAAAGGPGAAGDVSARKVFVGNVPFEISSERLLSEFLKFGEVEEGPLGFDKSSGKTRGFAFFVYKTEEGARASLVEPVKTIEGNQVICKLAVDNKKTKPFGGDHHQQQQHQQQHQQQHQQQQVQQLQQQGPMLVSQYSGYGGNGYGMQHSVPPFNNSVQVAGGGVYGHGIGAGYGNSQLGGPVSGDYGGRVPPNSGGGFPDGSQYGFPPSSGLPSQPPVLMPRPPPGGMCFIQVCDGFLDANALNGCAAFVHADNEIFGFGYMDCCNMLLLHYLCFYNAILVSFDDALRCGNSAINSLYSR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14419g00002 454 Coils Coil 262 282 - -
Mupr14419g00002 454 MobiDBLite consensus disorder prediction 334 372 - -
Mupr14419g00002 454 Gene3D - 162 282 IPR012677 -
Mupr14419g00002 454 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 80 157 IPR000504 GO:0003723
Mupr14419g00002 454 PANTHER GEO13361P1-RELATED 59 289 - -
Mupr14419g00002 454 MobiDBLite consensus disorder prediction 1 32 - -
Mupr14419g00002 454 Gene3D - 71 158 IPR012677 -
Mupr14419g00002 454 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 169 251 IPR000504 GO:0003723
Mupr14419g00002 454 MobiDBLite consensus disorder prediction 250 282 - -
Mupr14419g00002 454 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 82 148 IPR000504 GO:0003723
Mupr14419g00002 454 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 171 228 IPR000504 GO:0003723
Mupr14419g00002 454 SUPERFAMILY RNA-binding domain, RBD 71 157 IPR035979 GO:0003676
Mupr14419g00002 454 SUPERFAMILY RNA-binding domain, RBD 166 261 IPR035979 GO:0003676
Mupr14419g00002 454 FunFam UBP1-associated protein 2C isoform A 63 165 - -
Mupr14419g00002 454 MobiDBLite consensus disorder prediction 257 282 - -
Mupr14419g00002 454 SMART rrm1_1 170 242 IPR000504 GO:0003723
Mupr14419g00002 454 SMART rrm1_1 81 153 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14419g00002 Mupr-Chr14419 16254 20595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14419g00002 152 244 C2H2 Transcription Factor Family AT2G19380 33.333 1.39e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14419g00002 K12741 - gmx:100804230 518.079