Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14400g00003 ATTCTTGAAGACTCTCCTAAGAAAAAGTGGGAAGCTATAACCCTCTCTCCTACTACACCTTGTACTCCCAACTCCAACACCAATTGGTTGGTGGAAGATAGCAGGAGCACAAAATGGACCCATGAAGAGAACAAGCTCTTTGAAAATGCTCTTGCAGTGCATGATAAGGACACCCCAGATCGGTGGCACAAAGTGGCTGAAATGATTCCAGGAAAGTCAGTAGGAGATGTGATCAGGCAGTACAAGGAGTTGGAAGTTGATGTTAGCAATATAGAAGCTGGCTTGATCCCAGTTCCTGGCTATGGTACTGCCACCTCATCCTTCACCTTGGATTGGGTGAACACTCCAGGCTATGATGGGTTTAAAGGAAGTGGAAAGAGACCTTCTTCAGTGAGACCTCATGAGCAGGAAAGGAAGAAAGGAGTGCCTTGGACTGAAGAGGAGCATAAATTGTTTCTACTGGGTCTGAAGAAGTATGGGAAAGGTGATTGGAGAAATATTTCTCGCAATTTTGTGATTACTAGGACCCCAACACAGGTGGCTAGCCATGCTCAGAAATACTTCATAAGGCAACTTTCAGGAGGCAAAGACAAGAGGAGGGCTAGCATACATGACATAACAACAGTGAATCTCACAGAAACCACCACAACTTCTTCAGAAGAAACCACTAGATCCACTTCACCACATGTGCTCTCACATCAGCAGCCAAATTCTCCTGCTACTACACCCAGAACTCATTTTCAGTGGACTAATCAGTCAGGAGTAGCAATGACTCTCAATCCTGCTCATGAAAGACTCTTCATGTCTCCTTATGGGCCTAACTCCTTTGAGGTTAAAATGCAAGGGCAGAATCTGCACAAGAGTGTTCTTCATGAGTCTTCTTACTTGGCACCTCAGACACAGAACATGGTTTTGGAATTCTATGTTGGTAAGAAAATTCATTGA 945 0.4434 ILEDSPKKKWEAITLSPTTPCTPNSNTNWLVEDSRSTKWTHEENKLFENALAVHDKDTPDRWHKVAEMIPGKSVGDVIRQYKELEVDVSNIEAGLIPVPGYGTATSSFTLDWVNTPGYDGFKGSGKRPSSVRPHEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTTTSSEETTRSTSPHVLSHQQPNSPATTPRTHFQWTNQSGVAMTLNPAHERLFMSPYGPNSFEVKMQGQNLHKSVLHESSYLAPQTQNMVLEFYVGKKIH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14400g00003 314 CDD SANT 38 84 IPR001005 -
Mupr14400g00003 314 ProSiteProfiles SANT domain profile. 34 89 IPR017884 -
Mupr14400g00003 314 FunFam Transcription factor SRM1 31 98 - -
Mupr14400g00003 314 Pfam Myb-like DNA-binding domain 38 82 IPR001005 -
Mupr14400g00003 314 Pfam Myb-like DNA-binding domain 143 188 IPR001005 -
Mupr14400g00003 314 ProSiteProfiles Myb-like domain profile. 136 188 IPR001005 -
Mupr14400g00003 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 192 IPR017930 -
Mupr14400g00003 314 SUPERFAMILY Homeodomain-like 137 191 IPR009057 -
Mupr14400g00003 314 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 34 281 IPR043363 -
Mupr14400g00003 314 MobiDBLite consensus disorder prediction 212 245 - -
Mupr14400g00003 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 139 191 IPR006447 GO:0003677
Mupr14400g00003 314 ProSiteProfiles Myb-like domain profile. 31 85 IPR001005 -
Mupr14400g00003 314 ProSiteProfiles SANT domain profile. 144 192 IPR017884 -
Mupr14400g00003 314 SUPERFAMILY Homeodomain-like 37 89 IPR009057 -
Mupr14400g00003 314 CDD SANT 143 188 IPR001005 -
Mupr14400g00003 314 MobiDBLite consensus disorder prediction 128 142 - -
Mupr14400g00003 314 SMART sant 35 87 IPR001005 -
Mupr14400g00003 314 SMART sant 140 190 IPR001005 -
Mupr14400g00003 314 MobiDBLite consensus disorder prediction 122 142 - -
Mupr14400g00003 314 FunFam transcription factor MYB1R1 142 193 - -
Mupr14400g00003 314 Gene3D - 31 98 - -
Mupr14400g00003 314 Gene3D - 142 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14400g00003 Mupr-Chr14400 23330 26461 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr14400g00003 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14400g00003 - - gmx:778034 484.182