Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14386g00002 ATGTCTCTGACGGGCCGTCCACGTGTTGTTGTGAACGGGGTTCGAAGAACGAGAACTTTTCACTATTTCTGGTGCCTATATTGCCAGAGAACCGTGAGGATACCCTTTACAAACAATGATATTGGTTCTATGTGCCCCTATTGCTTCCACCGATTACGTTACGAGCTTGATATCTCAAGGCCAAGGCTTCTCATGAACGTGCCAAATAACTTGGAGCCTTCACCAGCTACTCAAGCAATGCATAGCTTGGCCCTCATTCTTGATCCACCTCTAAGGAGGCAAAACAATCATTCAAACACAACCACACGATGGGAAGAACAAAGTGAAGATGGTTCAAATCCTCAGGCTTGGGTTACACTTCGTTATGCGGGACCAACTCATCCAACTAGGCCTATTTCCCCACCACAAAACTTGGTTCCCCATACCAATAATCACAATGACTCCATTTTTGAGAATACACTATTAAATGACTTCATTGATGGGGTGATTCAGAACAATAACAGACCAGGACCACCTCCAGCAACATCTTCAGCCATTGCATCATTGCCAATGGTGAAACTGACACAAGCCCATTTGGGAAGTGACCCCAACTGCCCTATTTGCAAAGATGAGTTTGAGCTTGACATGGAAGCGAGGGAGTTGCCATGCAAGCATTTCTACCATTCTGACTGCATCGTCCCTTGGCTGCGCATGCACAACACTTGCCCTGTGTGCCGCTATGAGCTTCAAGCTGTTGCTCGTGCTAGTGCTCATTACCGTTTCCATGATGATGAGAGTGACCTCAGGTTTGGGTTTGAGGATGTTACAAGCAGCTTGAGCTGGATTTGGAACCAACTCGCTTCGTTCAGACCTATCCGTTCAGTCCTACATTGGACACGCTCCTACTTTGATTTCCAAGAAAATCAACATGTTCCTCGTAGAGGTAAAAGGTGCAGTTCAAGAACACGAATGGTTGATACAGAAGAACTCGAAGGCTATTCTGATGTGCCCACAAGTTATGATTGA 1005 0.4597 MSLTGRPRVVVNGVRRTRTFHYFWCLYCQRTVRIPFTNNDIGSMCPYCFHRLRYELDISRPRLLMNVPNNLEPSPATQAMHSLALILDPPLRRQNNHSNTTTRWEEQSEDGSNPQAWVTLRYAGPTHPTRPISPPQNLVPHTNNHNDSIFENTLLNDFIDGVIQNNNRPGPPPATSSAIASLPMVKLTQAHLGSDPNCPICKDEFELDMEARELPCKHFYHSDCIVPWLRMHNTCPVCRYELQAVARASAHYRFHDDESDLRFGFEDVTSSLSWIWNQLASFRPIRSVLHWTRSYFDFQENQHVPRRGKRCSSRTRMVDTEELEGYSDVPTSYD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14386g00002 334 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 115 242 - -
Mupr14386g00002 334 MobiDBLite consensus disorder prediction 90 114 - -
Mupr14386g00002 334 Pfam Ring finger domain 197 239 IPR001841 -
Mupr14386g00002 334 SMART ring_2 198 238 IPR001841 -
Mupr14386g00002 334 CDD RING-H2_RNF126-like 197 239 - -
Mupr14386g00002 334 MobiDBLite consensus disorder prediction 92 114 - -
Mupr14386g00002 334 ProSiteProfiles Zinc finger RING-type profile. 198 239 IPR001841 -
Mupr14386g00002 334 ProSitePatterns Zinc finger C2H2 type domain signature. 235 255 IPR013087 -
Mupr14386g00002 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 245 IPR013083 -
Mupr14386g00002 334 FunFam E3 ubiquitin-protein ligase RING1-like 162 245 - -
Mupr14386g00002 334 SUPERFAMILY RING/U-box 178 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14386g00002 Mupr-Chr14386 12028 13484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14386g00002 1 299 C3H Transcription Factor Family AT1G68180 30.065 7.40e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14386g00002 K11982 - gmx:100793656 452.595