LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14369g00001	ATGGAAGCCACAAGGGCATGTGAGCCACCAGATTTTGATTTTTTCAGGGTGAGAGCCTGCCAGCCATGGCTTCTGCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCAATATCTACCCCAAGGCAAGTTAATTTCCCATCATTTGCAAATATATTTATGTTTCTTATATTCATGCATTCATAGTGAATGTGTATACAGTTCCCAGAAGAATGGGTCACAGTTGGGAACCCCAAAAGCTTATTTTCTTGGTGGGAGGAAATTGAGGGTGAAAAAGTACAGAGAAGCAGTTGGAGGAGGATCCAGGAGTACAGTGTGTGCAGTAGCTGAGCCTGACAGACCTCTCTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTAGATGGTAGTCTCCCTGGAGACTTTGGCTTTGACCCTCTTGGTCTTGGATCCGATCCGGAGAGTCTGAGATGGAATGTTCAGGCAGAGCTAGTGCACTGCAGATGGGCAATGTTGGGTGCAGCTGGGATTTTCATTCCAGAATTTTTGACAAAGATTGGTGTATTAAACACCCCATCATGGTACACAGCTGGAGAACTAGAATACTTCACAGATACAACAACACTATTCATAGTTGAGCTGTTTTTCATTGGTTGGGCTGAGGGTAGAAGGTGGGCAGACATAATAAAGCCAGGGTGTGTGAACACTGACCCAATATTTCCCAACAACAAGCTGACAGGAACTGACGTTGGTTATCCAGGTGGACTTTGGTTTGACCCTCTTGGATGGGGTACAGGTTCTCCTGAGAAGCTCAAGGAGTTGAGAACTAAGGAGATCAAGAATGGAAGATTGGCCATGTTGGCTGTCATGGGTGCATGGTTCCAGCACATTTACACCGGCACCGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCTACCATTTTCGCTGCTTTCACCCCTAATTCATCAAAG	960	0.4719	MEATRACEPPDFDFFRVRACQPWLLLVLPLPLQLLQYLPQGKLISHHLQIYLCFLYSCIHSECVYSSQKNGSQLGTPKAYFLGGRKLRVKKYREAVGGGSRSTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPNSSK	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14369g00001	320	SUPERFAMILY	Chlorophyll a-b binding protein	109	315	-	-
	Mupr14369g00001	320	Pfam	Chlorophyll A-B binding protein	121	287	IPR022796	-
	Mupr14369g00001	320	Gene3D	Chlorophyll a/b binding protein domain	122	307	-	-
	Mupr14369g00001	320	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	101	315	IPR001344	GO:0009765\|GO:0016020
	Mupr14369g00001	320	FunFam	Chlorophyll a-b binding protein, chloroplastic	122	307	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14369g00001	Mupr-Chr14369	4776	6360	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14369g00001	95	317	Chloroplast and Mitochondria Gene Families	AT3G61470	87.444	1.78e-145	408

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14369g00001	K08908		-	gmx:100784089	499.204