Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14360g00004 TTTCATCAGTACCAGGTTGTGGGAAGAGCTCTTCCCACAGAAACCGATGTGCATCCCAAGATCTACAGGATGAAGTTGTGGGCCACCAATGAGGTCCGCGCCAAATCTAAGTTCTGGTACTTCTTGAGAAAGCTAAAGAAGGTGAAGAAAAGCAATGGGCAAATGCTAGCCATCAATGAGATTTTTGAGAAAAATCCTACCAAGATTAAGAATTATGGAATTTGGTTGCGATACCAGAGCCGAACTGGCTATCACAACATGTACAAGGAATTCCGTGATACTACTCTAAATGGCGCGGTTGAACAAATGTACAATGAAATGGCATCTCGTCATAGAGTCAGGTGTCCATGCATCCAGATCATCAAGACTGCCACCATACCAGCTAAACTTTGCAAGAGGGAGAGCACCAAGCAGTTCCACAACTCCAAAATCAAGTTCCCATTGGTGTTCAAGAAGATCAGGCCCCCAACTAGGAAGCTCAAAACCACATACAAGGCCTCCAAACCCAATCTGTTTATGGAAATAACCAAAGTTCAGATTAAAGAACATCCATTAAATGGTATGCAGAGTTTTTAA 576 0.4288 FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYNEMASRHRVRCPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKIRPPTRKLKTTYKASKPNLFMEITKVQIKEHPLNGMQSF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14360g00004 191 Hamap 50S ribosomal protein L18Ae [rpl18a]. 1 64 IPR028877 -
Mupr14360g00004 191 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 2 123 IPR023573 GO:0003735|GO:0005840|GO:0006412
Mupr14360g00004 191 PIRSF Ribosomal_L18a 1 173 IPR021138 GO:0003735|GO:0005840|GO:0006412
Mupr14360g00004 191 Gene3D - 66 139 - -
Mupr14360g00004 191 FunFam 60S ribosomal protein L18a 1 66 - -
Mupr14360g00004 191 SUPERFAMILY RplX-like 66 141 - -
Mupr14360g00004 191 Gene3D - 1 65 - -
Mupr14360g00004 191 PANTHER 60S RIBOSOMAL PROTEIN L18A 1 172 IPR028877 -
Mupr14360g00004 191 FunFam 60S ribosomal protein L18a 67 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14360g00004 Mupr-Chr14360 16782 19557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14360g00004 1 173 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 92.486 9.07e-122 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14360g00004 K02882 K22683 gmx:100306365 352.829