Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14316g00002 ATGACCATAGAGAAGAGAACCAATGATTCTGACGGCGATTTTCCCATCGGAATGCGTGTTCTTGCCGTCGACGATGACCCCACTTGCCTCATGGTTTTGGAAACTCTCCTCCGAAGATGTCAATATCATGTAACCACGACTAATCAAGCAATAACGGCATTGGCGCTGTTGAGAGAACACAAAGACAAGTTTGACCTGGTAATAAGTGATGTGCACATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGACTTGAGATGGACCTTCCTGTCATAATGTTGTCTGCAAATGGTGATACAAAGCTGGTGATGAAGGGGATTTCTCATGGAGCCTGTGATTATCTGCTGAAACCTGTGAGAATGGAGGAGCTCAAGAACATTTGGCAGCATGTAATCAGGAGGAAGAAGATTGACTCAAAGGAGAAGAACAAAACCAGCAACCTAGGCAAACCTAATTTCGATAATAGCAATGGACTAGGGACATCAGGAGCAGGAAATTCAGATCAAAATGAGAAGCTGACTAAAAAAAGGAAGGATCAAGATGAAGATGAAGATGAGGATCAGGAGAATGATCATGATAATGAGGACCCATCTACCCAGAAGAAGCCTCGGGTTGTTTGGTCGGTGGAGCTGCATCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTACCTAAAAAAATTCTTGATATGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCGAGCCATCTCCAGAAGTATAGGCTTTATCTGAAAAGAATTAGCTGCGTGGCTAACCAGCAGGCTAATATGGTGGCGGCCTTAGGGGGTACTGATCCATCCTATTTGAGAATGAGTTCTGTGAATGGAGTTGGACATTTACAACCACTGAGTGGTTCTGGACAGCTTCACAACAATGCATTCAGATCTTTTTCACCTAGTGGGATATATAATAGATTAAACACTCCTGCTGGTTTGAATGTGCATGGATTTCCTTCTGGAGTACTTCAGTTGAGTCAATCACAAAATTTAAACAACAACAATGATCATCTCAAGTTCCAATCAGCCATGATTCCTGTTAATCAGAATGGTGTTCAGGGAATGCCAGTGTCTGTAGGGCTTGATCGATTGCAAAACAATAAGGGTATTATTTCTGTTCAGAACCCGACCTCTGTTTTTGATGCCAAAACAACTTTTCCCATTTCGAATAAACACCCAGATCCAAGACAAAAAATAACCACCTCTGGCTCTCACACTCCTGATCTGGGTATCTCAAACAATGCCTTGATGTTGGAACCACACCCTCAAGGTACACAAGGGAGTGTAAGATACGAAACTTTATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTCTGTCTTTGCTGGATCAAGGTAGATATAGTGATAATTGGTCAAGTGCTGTGCAGCCATCTGTTATCCAGACAAACTCTTACCCTCCAAGTGAATGTTTTAGACAGATTAATATACCTCCTACAGATAACATGGCTTCTATACCTTTGCAAGGTGGGAATTTGAGTGGTCCATCCATCACTTCATTGTCCAGGCAATCCCATGATTCATTGACAGATATGCACTCTGAAAGAGTTAAATTTTCTAACCGACCTGGACATATAAGCAGTAATGTGTCATTTCAAGGGTGGAATGACCATAATGAGGATGCTACTCACCATTCAAATATTATTTTTGGATCAATAAATTCAACGACTCCAGTTAATGGTGCTGCTGTTCTAGCAGGCCATGTAGCTTCGAATTCAACCTTACACAGAAACTTGGACTTCAACTTTTGTGATCCCTTACAAATGAAGCATGATGGATTTGTGGAGTTAACTGAAGATACCTTATCAAAACAACATCAGGGAAATATCATGAACCAGCAAAAGTCTCAACAAAGTGATTTCTCTAATAATCTTGGTTCACTAGAAGACTTGGTCAGTTCAATGATGAAACAGTACCATGTTCATACCATGCAGGAGAAAGATAAGATGAAATTATTGCACGGAGACCTCATTTGCGATAATTACTCTTCTGGTGGATATGTTGGCCTGCAAATTGGACTTAGATCTTCTCTCGCTTATAATGAGGAGAGAGACACAGGTCCAGGTGGAACCCACCTGACAAATGAGACCCACCTTAACCCTAGATGA 2172 0.4157 MTIEKRTNDSDGDFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTNQAITALALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHVIRRKKIDSKEKNKTSNLGKPNFDNSNGLGTSGAGNSDQNEKLTKKRKDQDEDEDEDQENDHDNEDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGGTDPSYLRMSSVNGVGHLQPLSGSGQLHNNAFRSFSPSGIYNRLNTPAGLNVHGFPSGVLQLSQSQNLNNNNDHLKFQSAMIPVNQNGVQGMPVSVGLDRLQNNKGIISVQNPTSVFDAKTTFPISNKHPDPRQKITTSGSHTPDLGISNNALMLEPHPQGTQGSVRYETLSSSVASQHSEFSLSLLDQGRYSDNWSSAVQPSVIQTNSYPPSECFRQINIPPTDNMASIPLQGGNLSGPSITSLSRQSHDSLTDMHSERVKFSNRPGHISSNVSFQGWNDHNEDATHHSNIIFGSINSTTPVNGAAVLAGHVASNSTLHRNLDFNFCDPLQMKHDGFVELTEDTLSKQHQGNIMNQQKSQQSDFSNNLGSLEDLVSSMMKQYHVHTMQEKDKMKLLHGDLICDNYSSGGYVGLQIGLRSSLAYNEERDTGPGGTHLTNETHLNPR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14316g00002 723 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 260 IPR017930 -
Mupr14316g00002 723 MobiDBLite consensus disorder prediction 709 723 - -
Mupr14316g00002 723 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Mupr14316g00002 723 MobiDBLite consensus disorder prediction 141 206 - -
Mupr14316g00002 723 CDD REC_typeB_ARR-like 20 134 - -
Mupr14316g00002 723 MobiDBLite consensus disorder prediction 150 171 - -
Mupr14316g00002 723 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
Mupr14316g00002 723 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 379 IPR045279 GO:0009736
Mupr14316g00002 723 MobiDBLite consensus disorder prediction 702 723 - -
Mupr14316g00002 723 Coils Coil 172 192 - -
Mupr14316g00002 723 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Mupr14316g00002 723 SMART REC_2 18 130 IPR001789 GO:0000160
Mupr14316g00002 723 FunFam Two-component response regulator 200 263 - -
Mupr14316g00002 723 Gene3D - 17 152 - -
Mupr14316g00002 723 PIRSF RR_ARR_type-B 1 686 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mupr14316g00002 723 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Mupr14316g00002 723 Gene3D - 200 263 - -
Mupr14316g00002 723 Pfam Myb-like DNA-binding domain 206 256 IPR001005 -
Mupr14316g00002 723 SUPERFAMILY CheY-like 17 141 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14316g00002 Mupr-Chr14316 10983 15727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14316g00002 1 454 Response Regulator Gene Family AT2G25180 52.643 1.04e-134 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr14316g00002 Response_reg 1.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14316g00002 - K14491 gmx:100809002 1155.58