Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr142g00001 ATGATAACTCTTGCTCCTTCTCTTGATACCAAAGAGGTCTCTGCCTCTGCCTCTGCCTCTACAACTTGTGATGTTTCTCAAACTACCCATGTTTTCAAATCAAAATTACCGGATATACCCATCTCCAACCACCTACCCCTCCATGCCTACTGCTTCCAGAGGCTCTCCGAATTCGCCGATCGCCCCTGCCTCATCATCGGCTCCGCCGCCAAAACCTACACCTACGCCGAGACGCATCTCATTTCCCAAAAAATCGCCGCCGGATTGTCCAACCTAGGCATCCGCAAAGGCGACGTCGTCATGATCCTCCTCCAGAACTCCGCTGAGTTCGTCCTCTCCTTCCTCGCCGCCTCCATGATCGGCGCCGTCGCCACCACGGCGAACCCCTTCTACACCGCCTCGGAGCTTTTCAAGCAATTCACCGCCTCCAAGGCCAAGCTGATAATCACGCAGGCAATGTATGTGGACAAGCTTCGCCACCACGAGGGTGCCAAGCTCGGTGAGGACTTCAAGGTGGTGACCATCGACGAGCCGCCGGAGAACTGCCTGCACTTCTCGGTGCTCTCAGAGGCGAACGAGAGCGAGGTGCCGGAGGTGGAGATCCACCCGGACGACGCGGTGGCACTGCCATTCTCCTCCGGCACGACGGGGCTCCCGAAGGGAGTGATTCTCACGCACAAGAGTTTGACCACCAGCGTGGCGCAACAAGTGGACGGAGAGAACCCTAACCTCTATCTCAGCACCGAGGATGTGCTCCTCTGCGTGCTTCCGCTGTTTCACATATTCTCGCTCAACAGCGTTCTGCTGTGCGCGCTCAGGGCCGGGAGTGCCGTTCTGTTGATGCAGAAGTTCGAGATTGGGACGTTGCTGGAACTCATACAGCTGCACCACGTGTCCGTGGCGATGGTGGTGCCACCGCTGGTGCTGGCGCTGGCAAAGAATCCCATGGTGGCGGACTTTGATCTCAGTTCTATACGGTTGGTGCTATCCGGTGCTGCCCCCTTGGGGAAGGAGCTCGAGGAGGCTCTCCACAACAGGGTGCCTCAGGCTGTTTTGGGACAGGGGTACGGGATGACAGAAGCAGGACCGGTGCTGTCCATGTGCTTGGGCTTTGCAAAGCAACCATTCCCAACAAAGTCAGGGTCTTGTGGCACTGTAGTGAGAAATGCAGAGCTCAAGGTTGTTGACCCTGAAACTGGTCGTTCTCTTGGCTACAATCAACCCGGTGAAATTTGCATCCGAGGGCAACAGATCATGAAAGGATATCTGAACGATGATCAAGCGACAGCATCCACCATCGACGCTGAGGGTTGGCTTCACACCGGTGATGTTGGCTATGTAGATGATGATGATGAGATTTTCATTGTTGACAGGGTCAAAGAACTCATCAAATATAAAGGCTTCCAGGTGCCCCCTGCAGAACTTGAAGGGCTTCTTGTAAGCCATCCCTCCATTGCAGACGCGGCTGTTGTCCCACAAAAGGATGTCGCTGCTGGGGAAGTTCCTGTTGCCTTCGTTGTGAGATCAAACGGATTTGATCTAACTGAAGAGGCTGTAAAAGAGTTTATAGCTAAACAGGTAGTGTTTTACAAAAGGCTGCACAAAGTTTATTTTGTTCATGCTATTCCCAAGTCTCCATCAGGAAAGATATTAAGGAAAGATCTCAGAGCAAAGCTTGAAACAGCCGCCACCCCGACCCCTGGCCCTTAA 1710 0.5392 MITLAPSLDTKEVSASASASTTCDVSQTTHVFKSKLPDIPISNHLPLHAYCFQRLSEFADRPCLIIGSAAKTYTYAETHLISQKIAAGLSNLGIRKGDVVMILLQNSAEFVLSFLAASMIGAVATTANPFYTASELFKQFTASKAKLIITQAMYVDKLRHHEGAKLGEDFKVVTIDEPPENCLHFSVLSEANESEVPEVEIHPDDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLSTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGTLLELIQLHHVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALHNRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGQQIMKGYLNDDQATASTIDAEGWLHTGDVGYVDDDDEIFIVDRVKELIKYKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETAATPTPGP 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr142g00001 569 CDD 4CL 41 555 - -
Mupr142g00001 569 Gene3D - 460 563 IPR045851 -
Mupr142g00001 569 Pfam AMP-binding enzyme 54 465 IPR000873 -
Mupr142g00001 569 Pfam AMP-binding enzyme C-terminal domain 474 549 IPR025110 -
Mupr142g00001 569 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Mupr142g00001 569 FunFam Long-chain-fatty-acid--CoA ligase FadD 33 460 - -
Mupr142g00001 569 Gene3D - 22 459 IPR042099 -
Mupr142g00001 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 557 - -
Mupr142g00001 569 SUPERFAMILY Acetyl-CoA synthetase-like 41 561 - -
Mupr142g00001 569 FunFam 4-coumarate--CoA ligase 2 461 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr142g00001 Mupr-Chr142 3811 8909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr142g00001 28 472 Monolignol Biosynthesis Gene Families AT1G65060 71.652 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr142g00001 K01904 - gmx:547492 1007.28