Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1424g00001 ATGGAAACCTCCACTCATTCTTTCTGTACCACACCACTAATCAAAGTCTTCCAAACCATGAGAAAACGTATCAATATGGAAAGTGATGATGCTGAGTACAATTCCTCTGCCACATCCTCCTCTTCCACTTCCACTTCCACCATCACCACCCCTTCAATCTTCCTTGACACCAACACTACTACTACTTCTAGCACATCCTCCTCCTCAACCTCATGCACCAAACAACACTTCAAAACTCCTCAAAATGACTCAACCACTTCCCAAACCTCATTGCAAAATGAAAAGGACTCAAAGGAGTGCAACAAGAAGAGGCAAAGAGACAATAGCAACAATCATCCTACTTATAGGGGTGTGAGGATGAGGAATTGGGGCAAATGGGTGTCCGAAATCCGTGAACCGAGGAAGAAGTCAAGAATATGGCTAGGAACATACCCTACAGCAGAAATGGCAGCTAGAGCACATGATGTGGCTGCCATAGCCATCAAGGGCCATTCAGCATACCTCAATTTCCCTCAATTGGCTCAAAAACTTCCAAGGCCAGCATCCACATCACCTAAGGACATTCAAGAAGCAGCTGCAAAGGCTGCAAACACTACCTTTGATGTTGTTAAGCATTGTCAAAGTAGCAAAGAAGAACAAGAACCAAACCAAGCCTCATCTTCAACTCTCTCAATGGACAATACTCAAGAGTCTTCAAGTTCTCCCTCTACCAATGATGATGACACTTTGTTTGACCTTCCAGATCTTTTCCCTGATGGAAACCATGGACTTTGTTCCTATTCTTCTTCTTGGCATTTGTGTGCTGTTGATAGTGGTTTTAGGCTTGATGAGTCATTTTTTTGGGAGAACTATTAG 855 0.4339 METSTHSFCTTPLIKVFQTMRKRINMESDDAEYNSSATSSSSTSTSTITTPSIFLDTNTTTTSSTSSSSTSCTKQHFKTPQNDSTTSQTSLQNEKDSKECNKKRQRDNSNNHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAIAIKGHSAYLNFPQLAQKLPRPASTSPKDIQEAAAKAANTTFDVVKHCQSSKEEQEPNQASSSTLSMDNTQESSSSPSTNDDDTLFDLPDLFPDGNHGLCSYSSSWHLCAVDSGFRLDESFFWENY 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1424g00001 284 Pfam AP2 domain 113 164 IPR001471 GO:0003700|GO:0006355
Mupr1424g00001 284 CDD AP2 115 171 IPR001471 GO:0003700|GO:0006355
Mupr1424g00001 284 MobiDBLite consensus disorder prediction 95 110 - -
Mupr1424g00001 284 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Mupr1424g00001 284 MobiDBLite consensus disorder prediction 206 245 - -
Mupr1424g00001 284 FunFam Ethylene-responsive transcription factor 2 114 172 - -
Mupr1424g00001 284 Gene3D AP2/ERF domain 114 172 IPR036955 GO:0003700|GO:0006355
Mupr1424g00001 284 MobiDBLite consensus disorder prediction 28 117 - -
Mupr1424g00001 284 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Mupr1424g00001 284 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Mupr1424g00001 284 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 88 250 - -
Mupr1424g00001 284 SUPERFAMILY DNA-binding domain 114 172 IPR016177 GO:0003677
Mupr1424g00001 284 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Mupr1424g00001 284 MobiDBLite consensus disorder prediction 212 241 - -
Mupr1424g00001 284 MobiDBLite consensus disorder prediction 30 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1424g00001 Mupr-Chr1424 8263 9430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1424g00001 102 280 AP2-EREBP Transcription Factor Family AT2G44940 53.883 3.52e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr1424g00001 AP2 5.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1424g00001 - - gsj:114420351 397.512