Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1421g00003 ATGTTCTTCTCTGATGCGGTGGGGACAGGGGAGTTTGTGAAGAAGGTTTTAGAGATGGAAGGCAAGGCAGAAAGTCAAATGACATCAGCTGCAGCCTTTGTTGAAGGGGGGATTCAAGACTCCTGTGATGATGCTTGCAGCATATGCCTTGAGGAGTTTTGTAAAAGTGATCCTTCATCGGTCACTACTTGCAAGCACGAGTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGCGAAGCTCCCAGTGTCCTATGTGTTGGCAACCTATTAGCTTGAAGGATCCTACTAGTCAGGAATTGTTTGAGGCAGTAGAGCAGGAGAGAAGCTTGAGGGTTACCCCACCAAGAAGTGCTGCTATTTTTCATCACCCTGCCTTAAGTGATTTTGAATTGCAGCATTTGCGCATGAGTGTAAATGATGCTGATTTTGAAGAGAGAGTTATTCAACATATAGCTGCTGCTGCAGCAATAAGGAGAGCAAACCAACTTGGTCGGAGGCAAGGGCAGCGAACTCGTTCATCAGCAAATGGTCATCCACGCTACTCAGTGCTTACTCAGCCTATTGCACCTTCATCAGGTCCCGATTCTTTTTCTGGAGGGGAAAATGAACCGGCTAGAATTCCTAATAGAAGTCCATCTACCTCAATGACATCTGATGGACATGAATCATCACAGCCGATCCTGCACCTTCAAACTCAAAGCTCTTCTTCAGCTTCTGGATCTACTGTCTTTGCAACAAATCGCCAAGGAATTTACTCTAATGATAGAGGCTCTACTGCCCATTCTTCACCAGCAAACCAAGATAGGGCAGGGCCATCAGAATTTCAGTCATTTTCTGATTCTCTGCGGTCCAGACTTAATTCGGTGTCCATGAAATACAAAGAGTCAATCTCAAAGGGTGCAAGGGGATGGAAGGAGAGGTTGTTCTGTCATAGTTCTTCCATGTCAGAGCTTAATTCAAAAACAAGGAGAGAGGTGAATGTTGGAATTGCTAGTGTATCCCAATTGATGGAATCCCTTGAAACTAGTGAAAATAATAGAGTTGTGGGTACTTCTTTGTCAAATCATGTGGAGGATTGTTCCATGGGACGGGTGAACAACCAGAATAATGTTGAAGCTAGTGGGGAGAACTCTTCACATGATGAAAATACTCCAGCTGCCTTTTCTACTGATGCAACTTTCCTCAGCATCTCATATTTGAAG 1203 0.4447 MFFSDAVGTGEFVKKVLEMEGKAESQMTSAAAFVEGGIQDSCDDACSICLEEFCKSDPSSVTTCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELFEAVEQERSLRVTPPRSAAIFHHPALSDFELQHLRMSVNDADFEERVIQHIAAAAAIRRANQLGRRQGQRTRSSANGHPRYSVLTQPIAPSSGPDSFSGGENEPARIPNRSPSTSMTSDGHESSQPILHLQTQSSSSASGSTVFATNRQGIYSNDRGSTAHSSPANQDRAGPSEFQSFSDSLRSRLNSVSMKYKESISKGARGWKERLFCHSSSMSELNSKTRREVNVGIASVSQLMESLETSENNRVVGTSLSNHVEDCSMGRVNNQNNVEASGENSSHDENTPAAFSTDATFLSISYLK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1421g00003 401 MobiDBLite consensus disorder prediction 207 279 - -
Mupr1421g00003 401 MobiDBLite consensus disorder prediction 161 279 - -
Mupr1421g00003 401 SUPERFAMILY RING/U-box 39 94 - -
Mupr1421g00003 401 SMART ring_2 46 86 IPR001841 -
Mupr1421g00003 401 ProSiteProfiles Zinc finger RING-type profile. 46 86 IPR001841 -
Mupr1421g00003 401 FunFam E3 ubiquitin-protein ligase RHF2A 18 120 - -
Mupr1421g00003 401 Pfam Ring finger domain 45 86 IPR001841 -
Mupr1421g00003 401 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 95 IPR013083 -
Mupr1421g00003 401 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 30 95 - -
Mupr1421g00003 401 MobiDBLite consensus disorder prediction 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1421g00003 Mupr-Chr1421 25376 29558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1421g00003 43 86 C3H Transcription Factor Family AT5G15790 52.273 2.13e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1421g00003 K19043 - gmx:100800419 580.867