Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14219g00002 ATGAGAGGAGAGATAGTACAAGGCCGAGACGGAGCGTCACGAGCGAGAGGGAAAGAGAAGAGAGATAGGGAGAGCGAGCGAGATCTTCGATTTAGGGCGGCGAGTGTGAGATTTTTAGGGAGAGAGAGACCGGTGGATAGGGATTTTTCCCTCTGCAACGTTCCCTTCTCTTTCATTTTTCTGATGGAGCAGCGAAAGCTTGTGGTTTTGGGAATTCCGTGGGATGTCGATACTGAGGGATTGAGGGAATATATGAGCAAGTTTGGTGAGCTGGAAGATTGCATTGTCATGAAGGAGCGTTCAACTGGACGGTCTCGTGGTTTTGGATATGTTACATTTGCTTCGGTGGATGATGCTAAGGAAGTATTATCAAGTGAACATATTCTTGGTAATAGGACGCTGGAAGTCAAAGTGGCCACACCAAAGGAGGAAATGAGGGCACCAGTCAAAAAAGTTACTAGAATATTTGTAGCCAGGATTCCACAATCAGTAACAGAAGCTACTTTTCGAAGTCATTTTGAGAAATATGGTGATATAACTGATTTGTACATGCCAAAGGATCAAGGCTCCAAAATGCATCGTGGAATTGGTTTCATCACTTTTGCAAGTGCAGATTCTGTGGAGAATTTGATGTCAGAAACCCATGAACTGGGAGGTTCTACTGTGGTGGTTGATCGAGCTACACCTAAGGCAAGAGATGATGACTTTAAGCCAGTTGGCAGAATGCCACAAGGAGGATATGGTGCATACAATGCTTATATTTCTGCAGCCACTAGATATGCAGCACTTGGTGCTCCTACTTTGTATGACCATCCTGGCCCAATTTATGGACGGGGAGAGCCTGCTCGGAGAACCAGTAAAAAGATTTTTGTTGGCCGTCTTCCCCCAGAGGCAACTTCTGAGGATCTTCGTCAATATTTTGGAAGATTTGGCCGTATATTAGATGTTTATGTTCCAAGGGATCCTAAGAGAACAGGTCATAGAGGTTTTGGATTTGTTACTTTTGCTGAAGATGGTGTCGCAGATCGTGTTTCTCGAAGGTCTCACGAGATTTGTGGACATCAGGTGGCAATAGATTCGGCTACACCTGTTGATGATGCAGGGCCCAGTGGGAATTTTATGATGAATAGTATGGAATCTTTTGGGGGATATGGCGGTCCTGTGCGAAGTTATGGGAGGATGTATGGTAGCTTAGACTTTGACGATTGGGGTTATGGAATTGGGAGACCATCAAGAGCAGATTGGAGAGTGGAAGTGGTGATGCTGATGTATGATCCATAA 1281 0.4496 MRGEIVQGRDGASRARGKEKRDRESERDLRFRAASVRFLGRERPVDRDFSLCNVPFSFIFLMEQRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLSSEHILGNRTLEVKVATPKEEMRAPVKKVTRIFVARIPQSVTEATFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSTVVVDRATPKARDDDFKPVGRMPQGGYGAYNAYISAATRYAALGAPTLYDHPGPIYGRGEPARRTSKKIFVGRLPPEATSEDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPVDDAGPSGNFMMNSMESFGGYGGPVRSYGRMYGSLDFDDWGYGIGRPSRADWRVEVVMLMYDP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14219g00002 426 FunFam heterogeneous nuclear ribonucleoprotein 1 145 239 - -
Mupr14219g00002 426 FunFam RNA-binding family protein isoform 1 284 367 - -
Mupr14219g00002 426 SUPERFAMILY RNA-binding domain, RBD 283 386 IPR035979 GO:0003676
Mupr14219g00002 426 SUPERFAMILY RNA-binding domain, RBD 150 248 IPR035979 GO:0003676
Mupr14219g00002 426 SMART rrm1_1 288 359 IPR000504 GO:0003723
Mupr14219g00002 426 SMART rrm1_1 66 137 IPR000504 GO:0003723
Mupr14219g00002 426 SMART rrm1_1 154 225 IPR000504 GO:0003723
Mupr14219g00002 426 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 284 394 - -
Mupr14219g00002 426 Gene3D - 150 236 IPR012677 -
Mupr14219g00002 426 Gene3D - 62 149 IPR012677 -
Mupr14219g00002 426 Gene3D - 282 367 IPR012677 -
Mupr14219g00002 426 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 153 229 IPR000504 GO:0003723
Mupr14219g00002 426 FunFam heterogeneous nuclear ribonucleoprotein 1 63 144 - -
Mupr14219g00002 426 SUPERFAMILY RNA-binding domain, RBD 63 146 IPR035979 GO:0003676
Mupr14219g00002 426 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 141 IPR000504 GO:0003723
Mupr14219g00002 426 MobiDBLite consensus disorder prediction 1 23 - -
Mupr14219g00002 426 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 289 343 IPR000504 GO:0003723
Mupr14219g00002 426 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 134 IPR000504 GO:0003723
Mupr14219g00002 426 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 155 213 IPR000504 GO:0003723
Mupr14219g00002 426 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 287 363 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14219g00002 Mupr-Chr14219 17662 22268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14219g00002 78 335 Eukaryotic Initiation Factors Gene Family AT2G36660 24.427 1.64e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14219g00002 K14411 - gmx:100795240 702.59