Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1420g00007 ATGGTCACCGACAACTCTAACAACGACATGGTGATTCCCAAGCCAGGAACTCTCTATTTTGCCGTTGTCCAACAAGGCCCATTGTGGATTATATTCGAGCGCAACATGATCATTGAGTTAAGTGGCCTCACCATGCAATACGTGAACAATGTCATCATCCATGAAATTTGTGTCAAGAAAATTGTGCCCAAAGATGACGACATGATCAGGGACTCCTACAACCACTTTGGGTTGAGGACAAAGAGTGATGACAATGCCATTTCGCTATTTGGAGCCTCCAATATTTGGATAGATCATGTTTCCCTCTCTGACTTTGCTGACGATCTTATCGATGTCATCATGGGCTCTACTACTGTAACCATCTCAAATTGCCACATGACCAAACATAACGATGTGGTGCTATTTGGGGTCAAATACTAG 420 0.4333 MVTDNSNNDMVIPKPGTLYFAVVQQGPLWIIFERNMIIELSGLTMQYVNNVIIHEICVKKIVPKDDDMIRDSYNHFGLRTKSDDNAISLFGASNIWIDHVSLSDFADDLIDVIMGSTTVTISNCHMTKHNDVVLFGVKY 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1420g00007 139 PANTHER PECTATE LYASE 18-RELATED 2 41 IPR045032 GO:0030570
Mupr1420g00007 139 SMART amb_all 5 138 IPR002022 -
Mupr1420g00007 139 Pfam Pectate lyase 37 136 IPR002022 -
Mupr1420g00007 139 Gene3D - 1 139 IPR012334 -
Mupr1420g00007 139 SUPERFAMILY Pectin lyase-like 4 136 IPR011050 -
Mupr1420g00007 139 PRINTS Pollen allergen Amb family signature 107 128 IPR018082 -
Mupr1420g00007 139 PRINTS Pollen allergen Amb family signature 7 32 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1420g00007 Mupr-Chr1420 22106 22597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1420g00007 1 138 Polysaccharide Lyase AT1G14420 54.321 5.69e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1420g00007 K01728 - gmx:100785801 199.904