Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14198g00002 GTTCCAAGTGATCAAAAACTGCCATCTCTCTATCTCTTAGACAGTATCGTGAAGAACATTGGGCGGGATTATATAAAATATTTTGCTGCCAAACTACCTGAGGTATTCTGCAAGGCATACAGACAGGTTGATCCTTCTGTCCATTCAAGTATGAAACATCTTTTTGGAACTTGGAAAGGAGTCTTCCCTCCTCAGTCCCTTCAGATGATTGAAAAGGAACTTGGCTTTGCACCTGCAGTCAATGGTTCAGCTTCGGTATCTGCTACAGTCAGGAGTGATTTGCAGTCACAACGCCCACCTCATAGTATCCATGTGAATCCCAAGTATTTAGAAAGGCAGCGTCTTCAGCAGTCAAGTAGGAGTAAAGAAGCAGTTAATGATATGACTGGAGCTATTTTAAACTCAAATGAGGATTCGGAGAGGCCGGATAGAGCTTTGGGTGCTGCACGACCATGGCTGGATCCTAGGATTAACCTGCAGTGGTGCATATTGCAGAACAATCAGCACACACATAGAGATGCATTCAATGATTCTGTTCCTGAAAAGGGCATTGGTGGATCATATGGAGGCAGTGAATGTAGTTCTGGCATTTCAAGTAATTGGATCTCAGGGGCTGGAAGAACTGGAAGTAGGCACATTGATTTAGGGCATGACAAAACATGGTTCAAAACAGGTGGTGGTGATGCAGATACCATATCTGGGCAAAGAAATGCTTTCAGTCTCAAGCATAATTTTTCAAATCATGAAGTGCCAAAGTCCACTAATTTGGATGCACACCGTCAGCCAAGACAATACATAACTAACATACAGAGCATTGTGATGTCAGGTAACTGGAAAAATTCTGAAGAAGAGGAGTTCACGTGGGATGAGATGAATTCTGGTTTGACTGATCATGGACCCAGTGTGTCAAGCAATTTTGGCACAGACTCATGGATGGCCGATGATGAAAATTTGGAAGGTGAAGATCACCTCCAAATCACACGCCCTTTTGGCACAAAGGTTGATAGAGACATATCCACTGTTATGAAACAACTACCTGGTTTTGGGAGCCATCCACCATCATCATGGCAATTGCAGAAGCATCACTCAATTGATAAGTTCAATCTGAAGTCTGGTTACTCAGAAGGATTTGTGTCCACTCATAATAGCTTACCAGCCAATGCAAGTTCTTTAGCTGTCAAGAAGGGGAACCAATCTTCTCTGCCAAATGCAGCAGTAGGAATGGACAAAATTGTGGGACAACAATTCGATTCTGGGGAAACCGAATCCCCTTCTGGGCAGTCACCTTTGCGACAACAGTCTCCACCACTGCTGGGAACAGTACATCACCCTCTTTCAATGCAAAATTCGGCTGAGCAAGAAAATCCCCAGAATCTCAAAACGTCTCAATTTTTGGGAGGTCCGAGAAGTCAACATATTAGAGATCCCTCACCTACCCTTCACCCCATTGTTCAGGTTGGTAACCTGCGAAGATCAGAGGAAAAGGACCTGCATGGCACATTATCTTCTGTAACTTCTTATCGACCAAAGCTTCAGCAACAGAAGCAGGACCCTTCTCAGACTGAAGTTACTGCTAAAACTAAGCTGCCCCAGTCTAAAATTTCTTTAGCCAGAGAAACTTCAGAACTGTCGACCACAAATAATTTGTCAGCTGCAGCTGTCAAGAGTGGAATCATCCCCAATAAATCAATTACCAATAATCTGGATCCAAGGAAGCTTCCATCTCAGTCTGGGTTTCAGCCAACTAGGTCTGGTAGGTCTTCTACTACATTAATTTCTTTAGGGTCTGCAGTTGCATCGCCATCTTCATTAGATCCTCTGCATAATGATTCATCTACAGTGCCTAAAAAACCTCAAAGAAAGGCTGGACAACCACCACAAAGGCTTTCTACTCAACCACTTGCTTCCTCTAATGTGAGCAGTTCCTCAGCTTCGAGCTTAAATGCTGCCAATAATAATAACTTAAATCCAATTGCAAACCTTTTAAGCTCATTGGTTGCAAAGGGTTTGATATCTGCCGAAACAGAGTCACCAACTGTGGTACCAAGCGAGGTGCCAATGGGACCCAAAGATCAAACTGAAATCATTACCGCCAGTTGCTCTTTACCGGTTACATCAGTTTCTGGTTCTGCAGCTGTCCCAGTATCATCCAGAGATGAGGTAGATGCTGTTACGAAAACCTCACTTGCCTTGCCTCAATCAACTAGCACAGAAGTCAGAAATCTCATTTGCTTCGATTTTAGACCTAATGTAATTCGAGAATTCCATCCAACTGTAATTAGTGACTTATTGGATGATTTCCCTCATCATTGCAAAATTTGCGGTATTAGGCTTAAACAAGAAGAACAGTTGAATAGACACTTGGAGTGGCATGCCACAAGAGAACAGCATGGTCTAATTAAGGGATCAAGAAGCTGGTATGCAAAGTCAAGTGATTGGATTGCTGGCAAGGCAGAATATTCATCTGAGTTTGAGTTTACCGACTCTGTCGATGTAAATGATGACAAAAAAACAGACAGCAGTCAATTGGATACGATGATTCTAGCAGATGAAAACCAGTGCCTATGTGTGTTGTGTGGCGAGCTATTTGAAGATGTGTACTGTCAGGAAAGGAACGAGTGGATGTTCAAAGGGGCCGTTTACATGAACTACTCAGATATCAATAGTGATATTGACAGTAGAAATGTGGGTCCCATCATTCATGCCAAATGCTTATCTAAGAACTCAATTGCCACCAATTTGAACAGAAAAGTTTAA 2757 0.4273 VPSDQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDPSVHSSMKHLFGTWKGVFPPQSLQMIEKELGFAPAVNGSASVSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSRSKEAVNDMTGAILNSNEDSERPDRALGAARPWLDPRINLQWCILQNNQHTHRDAFNDSVPEKGIGGSYGGSECSSGISSNWISGAGRTGSRHIDLGHDKTWFKTGGGDADTISGQRNAFSLKHNFSNHEVPKSTNLDAHRQPRQYITNIQSIVMSGNWKNSEEEEFTWDEMNSGLTDHGPSVSSNFGTDSWMADDENLEGEDHLQITRPFGTKVDRDISTVMKQLPGFGSHPPSSWQLQKHHSIDKFNLKSGYSEGFVSTHNSLPANASSLAVKKGNQSSLPNAAVGMDKIVGQQFDSGETESPSGQSPLRQQSPPLLGTVHHPLSMQNSAEQENPQNLKTSQFLGGPRSQHIRDPSPTLHPIVQVGNLRRSEEKDLHGTLSSVTSYRPKLQQQKQDPSQTEVTAKTKLPQSKISLARETSELSTTNNLSAAAVKSGIIPNKSITNNLDPRKLPSQSGFQPTRSGRSSTTLISLGSAVASPSSLDPLHNDSSTVPKKPQRKAGQPPQRLSTQPLASSNVSSSSASSLNAANNNNLNPIANLLSSLVAKGLISAETESPTVVPSEVPMGPKDQTEIITASCSLPVTSVSGSAAVPVSSRDEVDAVTKTSLALPQSTSTEVRNLICFDFRPNVIREFHPTVISDLLDDFPHHCKICGIRLKQEEQLNRHLEWHATREQHGLIKGSRSWYAKSSDWIAGKAEYSSEFEFTDSVDVNDDKKTDSSQLDTMILADENQCLCVLCGELFEDVYCQERNEWMFKGAVYMNYSDINSDIDSRNVGPIIHAKCLSKNSIATNLNRKV 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14198g00002 918 CDD CID_Pcf11 1 67 IPR047415 -
Mupr14198g00002 918 MobiDBLite consensus disorder prediction 561 647 - -
Mupr14198g00002 918 SMART 558neu5 1 75 IPR006569 -
Mupr14198g00002 918 ProSiteProfiles CID domain profile. 1 78 IPR006569 -
Mupr14198g00002 918 ProSitePatterns Zinc finger C2H2 type domain signature. 771 791 IPR013087 -
Mupr14198g00002 918 MobiDBLite consensus disorder prediction 416 528 - -
Mupr14198g00002 918 Pfam CID domain 3 68 IPR006569 -
Mupr14198g00002 918 MobiDBLite consensus disorder prediction 416 435 - -
Mupr14198g00002 918 SUPERFAMILY ENTH/VHS domain 2 78 IPR008942 -
Mupr14198g00002 918 MobiDBLite consensus disorder prediction 443 468 - -
Mupr14198g00002 918 MobiDBLite consensus disorder prediction 499 528 - -
Mupr14198g00002 918 ProSiteProfiles Zinc finger C2H2 type domain profile. 769 796 IPR013087 -
Mupr14198g00002 918 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 908 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Mupr14198g00002 918 Gene3D - 1 75 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14198g00002 Mupr-Chr14198 9902 15424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14198g00002 743 904 C2H2 Transcription Factor Family AT4G04885 36.471 1.59e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr14198g00002 CID 1.5e-08 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14198g00002 K14400 - gmx:100788958 1413.28