Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14178g00001 ATGGATGGTGCCACTCCCTTCGACTCTAAGCATTCCTTTTATAATATATCAAGAGGTGTAGTTGTTGAGGACTACTATAACGGGGGTCAGCTGGCGGTTTCTACACGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCTCAAATGGGAAGAAGACACATGTTAGGCCCTCCTGGAACCCTAAATACTATCACCCCTTGTGCAGCATGTAAGTTGTTGAGAAGAAGATGTGCTCAAGAGTGTCCCTTTTCTCCATATTTTTCTCCCCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCCAAGATGCTAATGGAAGTACCAGAGATTCAGAGAGCTGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTGAGGCTAAGAGACCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTAAGGTCTGAAATACTTAAATACAAACTCAGGGAAGCTAACATGATACCCTCCTCTCATGTTGCAATGCTCCCTTCATCTGGGGCTGTTTCAATTGCTGCTCCGCCGCCGCCGCCTCCACCACCTCCTCCTTCTCTTCCTCCAAATTCTTCCTCTTCTTCCATGTACATCCAACAGAGGGATCCCACCACTTATACCACAATTTCAAGTGATAATATTTCCTATTTTGATGCATCAAGGTGGAATAAACAAAGGACAATTAATAAAGGGGAAAAGAAACTTGGTTTATATGCCATTGATGATATTTCAATTTGGTTTGGGAAACATTGCAAAGGGTGGGAGGTGGGAATCCCTGGTATTGTTGGTAGAATTAATTTTGCACGTGACGACTGT 897 0.4337 MDGATPFDSKHSFYNISRGVVVEDYYNGGQLAVSTRERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPEIQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRSEILKYKLREANMIPSSHVAMLPSSGAVSIAAPPPPPPPPPPSLPPNSSSSSMYIQQRDPTTYTTISSDNISYFDASRWNKQRTINKGEKKLGLYAIDDISIWFGKHCKGWEVGIPGIVGRINFARDDC 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14178g00001 299 MobiDBLite consensus disorder prediction 200 228 - -
Mupr14178g00001 299 MobiDBLite consensus disorder prediction 200 217 - -
Mupr14178g00001 299 Pfam Lateral organ boundaries (LOB) domain 73 170 IPR004883 -
Mupr14178g00001 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 69 211 - -
Mupr14178g00001 299 ProSiteProfiles LOB domain profile. 72 173 IPR004883 -
Mupr14178g00001 299 Coils Coil 152 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14178g00001 Mupr-Chr14178 2890 6545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14178g00001 58 200 AS2 family AT2G40470 85.714 1.32e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr14178g00001 LOB 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14178g00001 - - ccaj:109797870 360.147