Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14172g00001 ATGGCCACATCTCGCACTCTTCTTCACCACTCCGACTCACGCGTGTCGCACATGCACTACTTCTCCACCGACGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGACGACACCGACCTCGACGACGACTTCCACAATGTCAGCGGCGCCGAGGAGGACCCCAAGAACCCCGACATCGGCTCAGGCGGTTTCCGGCGAGTGCTGCTTGACCCGAAGGCCAAGTGGGTCCAAGAATGGAACAGGGTGTTCCTGCTCGTGTGTGCTACCGGGTTGTTCGTGGACCCGCTCTTCTTCTACGCGCTCTCTATAAGCGACACGTGTATGTGTCTCTTCGTCGACGGCTGGCTCGTCATCACCGTCACGGTGCTTCGCTGCATGACTGACGCATTGCACTTTTGGAACATGTGGTTGCAGTTCAACATGGCCAAACGCTCTTTGTTTCTCACAAGAGATAGAGACTCTAACACCACCACACATGGCAACTTTCCTCTTCACTACCTCAAGGCTAAGAGGGGCTTTTTCTTTGACCTCTTTGTCATTCTTCCTATTCCCCAGATTGTGCTGTGGGTGGCAATTCCCTCTCTGTTGGAGAAAGGATCAATTACGTTGGTGATGACAGTGTTCTTAATTATGTTCCTCTTTCAATATCTTCCCAAAATTTATCACTTGGTTTGCCTCTTGCGTCGCATGCAAAACCTCTCTGGCTACATTTTTGGAACCGTTTGGTGGGGTATCGCCCTCAACCTCATCGCATATTTTGTAGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTGGGAGTGCAAAGGGCAGCAAAATGCCTTGAAGAGCAGTGTGTTAAAACAAGTGGTTGTGGGTTGAGAACACTGTGCTGTAAAGAACCTATATACTATGGAGGCACTAACGTTGTAAGAGACAAGACCAGGTTGGCATGGGCGGAGAACAGGGAAGCAAGGTCTACTTGTTTGGATAGTGCTAATAACTATGACTATGGTGCATATGAATGGACTGTTCAACTCGTTACAAATGATAGCCGATTGGAAAAGATACTTTTCCCCATCTTCTGGGGCCTAATGACTCTTAGTTTCACTGCTTTGTTTATTGTTGATGTGACCAGCACTTTTGGGAACCTAGAAAGCACACCGGAGCGACTAGAAGTGATTTTCAACATTATTGTGTTGACTAGTGGCCTCCTTCTAGTGACGATGCTGATTGGAAACATCAAGGTGTTTTTGCATGCCACAACATCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGCAAAAGGCGATTGCCGCAAGGGTTCCGGCAGCGCGTGAGAAACTATGAGCGGCAGCGTTGGGCTGCCACGCGCGGGGTTGATGAATGTCAGATGATCAAAAATCTTCCAGAGGGACTAAGAAGGGACATCAAGTACCATCTTTGTTTGGATTTGGTGAGACAGGTGCCACTATTTCAGCATATGGATGATTTGGTGCTTGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACAATAACGAGAGAGGGAGACCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGTCACCTTCAGAGCAGCCAAGTCCTAAGAGACGGGTTGAAAAGTTGCTGCATGTTAGGCCCAGGGAACTTCAGTGGCGACGAGTTACTCTCATGGTGTCTAAGAAGGCCCTTTATAGAACGTCTTCCACCATCTTCAAGCACTTTGGTGACGCTGGAAACCACTGAGGCATTTGGGCTGGAAGCCCAGGATGTGAAGTACGTGACCCAACATTTTAGGTACACATTTGTGAAGGAAAAGGTTAAGAGAAGTGCGAGGTATTACTCGCCGGGCTGGAGAACTTGGGCTTCTGTGGCCATTCAGCTTGCTTGGAGGAGGTATAGGCACCGCTTGACTTTGACGTCTTTGTCCTTTATAAGGCCTCGCAGGCCCGCTTCTAGGTGCACTTCCATGGAAGAGGGTAGGCTTCGTCTCTATACGGCTTTGTTAACCTCACCCAAGCCTAATCAAGATCACTTTGACTGCTCATAA 2070 0.4874 MATSRTLLHHSDSRVSHMHYFSTDEEEEEEEEEEDDDTDLDDDFHNVSGAEEDPKNPDIGSGGFRRVLLDPKAKWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLFVDGWLVITVTVLRCMTDALHFWNMWLQFNMAKRSLFLTRDRDSNTTTHGNFPLHYLKAKRGFFFDLFVILPIPQIVLWVAIPSLLEKGSITLVMTVFLIMFLFQYLPKIYHLVCLLRRMQNLSGYIFGTVWWGIALNLIAYFVASHAAGACWYLLGVQRAAKCLEEQCVKTSGCGLRTLCCKEPIYYGGTNVVRDKTRLAWAENREARSTCLDSANNYDYGAYEWTVQLVTNDSRLEKILFPIFWGLMTLSFTALFIVDVTSTFGNLESTPERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGFRQRVRNYERQRWAATRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAQDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWASVAIQLAWRRYRHRLTLTSLSFIRPRRPASRCTSMEEGRLRLYTALLTSPKPNQDHFDCS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14172g00001 689 MobiDBLite consensus disorder prediction 24 42 - -
Mupr14172g00001 689 MobiDBLite consensus disorder prediction 16 59 - -
Mupr14172g00001 689 CDD CAP_ED 491 597 IPR000595 -
Mupr14172g00001 689 FunFam cyclic nucleotide-gated ion channel 4 489 607 - -
Mupr14172g00001 689 Pfam Cyclic nucleotide-binding domain 511 599 IPR000595 -
Mupr14172g00001 689 SUPERFAMILY Voltage-gated potassium channels 74 412 - -
Mupr14172g00001 689 ProSiteProfiles cAMP/cGMP binding motif profile. 491 601 IPR000595 -
Mupr14172g00001 689 Pfam Ion transport protein 79 408 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr14172g00001 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 653 - -
Mupr14172g00001 689 FunFam Cyclic nucleotide-gated ion channel 1 418 482 - -
Mupr14172g00001 689 SUPERFAMILY cAMP-binding domain-like 417 605 IPR018490 -
Mupr14172g00001 689 Gene3D Jelly Rolls 489 607 IPR014710 -
Mupr14172g00001 689 Gene3D Helix hairpin bin 416 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14172g00001 Mupr-Chr14172 6073 15150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14172g00001 68 687 Ion Channels AT5G54250 77.636 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14172g00001 K05391 - gmx:100800795 1143.26