Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1415g00001 ATGCTTTACCAAACTCCCTATCCTCTCCTCTTTCAATTTCACCCCTTGCCTTCTTCCTCCACTCCTCTCCTTGCAACCACACCTCTTTCTCTCCTCTCTCTCCCTCAGGCTGAGACAGAAATGGCGTGCGTCGAGGCTGCGTTGAAGAGCAATTATAGGAAAGAAATGGCCATAAAACTCAGCCCACAAACCTTCATGGAGGAGTTTAGTGTGCAAAACGGCACAACCTGCGACGATTTTTTCGTGGACGACCTCCTCGACTTCTCGCACGTGGAAGAGGAACCGGAACAACAACAAAAGGAACAAGAAGACACTGCTTGTGTCTCCCTTCAACAACAAAACCCAAGCCACGAACCCTGTACTTTCAAAGACGAATATGGCTCTGTGCCCACTAGCGAGCTCAGCGTTCCGACGGATGACGTGGCGGACTTGGAGTGGCTATCTCATTTCGTGGAGGATTCCTTCTCGGAGTTCTCCGCGGGCTTCCCCTCCGCAACGGAGAACCCGACGGGCCTTGCGGCGAAAGAGCCAGAGCCTGAACCGGAAAGCCCGGTTTTCACTTTCAAAACCCCGGTTCAGACCAAGGCGAGAAGCAAGCGAACCAGGAACGGTGTTCGCGTTTGGCCTCTCGGTTCCCCTTCCTTCACCGAGTCTTCCTCGAGCTCCACCACCTCCTCCTCCTCCTCTTCCTCCCCCTCTAGCCCCTTGCTAATTTACACCAACTTCCCCCAAAGCCTCGACCATGTTTCCTCCGAGCCCAAACCCAAGAAGCCCAAGAAAAAAACCTCTTCCGACAGTGCGGCCACCCTGGCGCCGCGACGCTGCAGCCATTGCGGGGTGCAGAAAACTCCTCAGTGGCGAACTGGGCCTCTCGGCCCAAAAACTCTTTGCAACGCATGTGGGGTCCGCTTCAAGTCGGGCCGGCTCTTACCCGAATATAGGCCCGCTTGTAGCCCAACATTCTCCAGCGAATTACATTCGAACCACCATCGTAAAGTGCTCGAGATGCGGCGGAAGAAGGAGACAGTGGTTGGGGTTGAGACTTGTTCTGGTTTAGCCCCTGCTCCTGTTGTTCCTAGTTTTTGA 1086 0.5451 MLYQTPYPLLFQFHPLPSSSTPLLATTPLSLLSLPQAETEMACVEAALKSNYRKEMAIKLSPQTFMEEFSVQNGTTCDDFFVDDLLDFSHVEEEPEQQQKEQEDTACVSLQQQNPSHEPCTFKDEYGSVPTSELSVPTDDVADLEWLSHFVEDSFSEFSAGFPSATENPTGLAAKEPEPEPESPVFTFKTPVQTKARSKRTRNGVRVWPLGSPSFTESSSSSTTSSSSSSSPSSPLLIYTNFPQSLDHVSSEPKPKKPKKKTSSDSAATLAPRRCSHCGVQKTPQWRTGPLGPKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKETVVGVETCSGLAPAPVVPSF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1415g00001 361 PANTHER GATA TRANSCRIPTION FACTOR 73 341 - -
Mupr1415g00001 361 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 271 331 - -
Mupr1415g00001 361 MobiDBLite consensus disorder prediction 246 271 - -
Mupr1415g00001 361 FunFam GATA transcription factor 264 350 - -
Mupr1415g00001 361 Gene3D - 267 342 IPR013088 GO:0006355|GO:0008270
Mupr1415g00001 361 MobiDBLite consensus disorder prediction 161 234 - -
Mupr1415g00001 361 Pfam GATA zinc finger 275 309 IPR000679 GO:0006355|GO:0043565
Mupr1415g00001 361 SMART GATA_3 269 323 IPR000679 GO:0006355|GO:0043565
Mupr1415g00001 361 ProSiteProfiles GATA-type zinc finger domain profile. 269 305 IPR000679 GO:0006355|GO:0043565
Mupr1415g00001 361 ProSitePatterns GATA-type zinc finger domain. 275 300 IPR000679 GO:0006355|GO:0043565
Mupr1415g00001 361 MobiDBLite consensus disorder prediction 212 234 - -
Mupr1415g00001 361 CDD ZnF_GATA 274 322 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1415g00001 Mupr-Chr1415 2644 3930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1415g00001 45 361 C2C2-Gata Transcription Factor Family AT5G66320 52.770 1.77e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr1415g00001 GATA 1.8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1415g00001 - - var:108335072 497.664