LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14153g00001	AATTGGAGTTGGGCCGAGCCTGATTCTGGGCCGGGTAAGTTTGAGGCGGATCGGCAAGTAGGGTTTCGTGGTTTTAACAGAGAGAGGAAGCGAGAGAGAACAGAGAGTGTTGTTGCTTCTCCGTCACAACTCTCTGCCAACATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTATGAGCTCGGTCGCCAGCCTGCTAACACTAAGCTGTCAAGCAACAAGACAGTCCGGAGGATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCACTGAGATTGGATACTGGAAATTACTCTTGGGGAAGTGAAGCTGTGACTCGCAAGACTCGTATATTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACACAGACCCTTGTCAAAAGTGCTATTGTTCAGGTTGATGCTGCTCCATTTAAACAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGGAAAAAGAAGACAGCTGCCAAGAAGGATGCTGCAGAGGAGGGTGATGCTGCTGTTGCAGAAGAAGTAAAAAAGAGTAATCATGTGCAGAGAAAATTAGAGAAGCGCCAGAAAGATCGCAAGCTTGATGCTCACATTGAGGAGCAGTTTGGTGGTGGGCGTTTGCTTGCTTGCATTTCCTCTCGACCTGGTCAATGTGGCAGATGTGACGGCTACATTCTGGAAGGTAAGGAGTTGGAATTTTACATGAAGAAAATCCAGAAGAAGAAGGGAAAGGGTGCCGCATGA	798	0.4762	NWSWAEPDSGPGKFEADRQVGFRGFNRERKRERTESVVASPSQLSANMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKDAAEEGDAAVAEEVKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRCDGYILEGKELEFYMKKIQKKKGKGAA	265

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14153g00001	265	MobiDBLite	consensus disorder prediction	53	72	-	-
	Mupr14153g00001	265	NCBIfam	ribosomal protein eS8	48	246	IPR001047	GO:0003735\|GO:0005840\|GO:0006412
	Mupr14153g00001	265	Pfam	Ribosomal protein S8e	52	244	IPR022309	-
	Mupr14153g00001	265	MobiDBLite	consensus disorder prediction	1	44	-	-
	Mupr14153g00001	265	MobiDBLite	consensus disorder prediction	58	72	-	-
	Mupr14153g00001	265	CDD	Ribosomal_S8e_like	52	244	-	-
	Mupr14153g00001	265	ProSitePatterns	Ribosomal protein S8e signature.	58	77	IPR018283	GO:0003735\|GO:0005840\|GO:0006412
	Mupr14153g00001	265	FunFam	40S ribosomal protein S8	79	208	-	-
	Mupr14153g00001	265	MobiDBLite	consensus disorder prediction	20	36	-	-
	Mupr14153g00001	265	Gene3D	Ribosomal protein S8e, subdomain	155	223	IPR042563	-
	Mupr14153g00001	265	FunFam	40S ribosomal protein S8	156	223	-	-
	Mupr14153g00001	265	Gene3D	-	75	260	-	-
	Mupr14153g00001	265	PANTHER	40S RIBOSOMAL PROTEIN S8	48	262	IPR001047	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14153g00001	Mupr-Chr14153	5170	7668	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14153g00001	48	253	Cytoplasmic Ribosomal Protein Gene Family	AT5G59240	84.951	2.18e-127	358

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14153g00001	K02995		-	gmx:100527664	370.933