Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14106g00001 TTAACGACATTCCAGGTTCCAAGTGATCAAAAACTGCCATCTCTCTATCTCTTAGACAGTATCGTGAAGAACATTGGGCGGGATTATATAAAATATTTTGCTGCCAAACTACCTGAGGTATTCTGCAAGGCATACAGACAGGTTGATCCTTCTGTCCATTCAAGTATGAAACATCTTTTTGGAACTTGGAAAGGAGTCTTCCCTCCTCAGTCCCTTCAGATGATTGAGAAGGAACTTGGCTTTGCACCTGCAGTCAATGGTTCAGCTTTGGTATCTGCTACAGTTAGGAGTGATTTGCAGTCACAGCGCCCTCCTCATAGTATCCATGTGAATCCCAAGTATTTAGAAAGGCAGCGTCTTCAGCAGTCAAGTAGGAGTAAAGGAGTAGTTAATGATATGACTGGAGCTATTTTAAACTCAAATGAGGATTCGGAGAGGCCAGATAGAGCTTTGGGTGCCGCACGACCATGGCTGGATCCTAGGATTAACATGCAGTGGTGTATATTGCAGAACAATCAGCAACATAGAGATGCATTCAATGATTCTGTTCCTGAAAAGAGCATTAGTGGATCATATGGAGGCAGTGAGTATAGTTCTGGTATTTCAAGTAATTTGATCCCAGGGGCTGGAAGAACTGGAAGTAGGCTCATTGATTTAGGGCATGAGACCATATCTGGGCAAAGAAATGTTTTCAGTCTCAAGCATAACTTTTCAAATCATGAAGCACCAAAGTCCATGTACTTGGATGCACATCGTCAGCCAAGACAATACATAACTAACATACAGAGCAATGTGATGTCAGGTAACTGGAAAACTTCTGAAGAAGAGGAGTTCACGTGGGATGAGATGAACTCTGGTTTGACTGATCATGGACCCAATGTATCAAGCAGTTTGGGCACAGAGTCATGGATGGCCGATGATGAAAATTTGGAAGGTGAAGATCACCTCCAAATCACCCGCCCTTTTGGGACAAAGGTTGATAGAGAAATATCCACTGTTAAGAAACAACTACCTGGTTTTGGGGGCCATCCACCATCATGGCAATTGCCGAAGGACCACTCAATTGATAAGTTGAATCTGAAGCCAGGTTACTCCGAAGGATTTGTGTCCACTCTTAGTGGCTTACCAGCCAATGCAAGTCCTTTGGCTGTCAAGAAGGGGACCCAATCTTTTATACCAAATGCAGTAGTAGGAATGGACAAAATTGTTGGACAATTCAATTCTGGGGAAACTGAATCCCCTTCCGGGAAGTCACCTTTGCGACAGCAGTCTCCACCACTGCTGGGAACAGTACATCACCCTCATTCAATGCAAAATTTGGTTGAGCAAGAAATCCCACAGAATATCAAAACGTCTCAATTTTTGGGAGGTCCGAGAAGTCAACATATTAGAGATCCCTCACCTACCCTTCGTCCCATTGTTCCAGTTGGTAACTTGCGAATATCACAGGAAAAGGACATGCATGGCCCATTATCTTCTGTAACTTCTTATCGGCCAAAGCTTCAGCAACATAATCTGGGCCCTTCTCAGACTGAAATTACTGCTAAAACTAAGCAGCCCCAGTCTAAAATTTCATTAGCCAAAGAAAATTCAGAACAGTCGACCACAAATAATTTGTCAGCTGCAGCTGTCAAGAGTGGAATCATCCCCAAGAAATCAATTACCAATAATCTGGATCCAAGGAAGCTTCCATCTCAGTCTGGGCTTCAGCCAATTCGGTCTGGTAGGTCTTCTCCTACCACATTAATTTCTTCAGGGTCTGCAGTTGCATCTCCATCTTCATTAGATCCTCTGCATAATGGTTCATCTACACTGCCTAAAAAACCTCAAAGAAAGGCTGGACAACCACCACAAAGGCTTTCTACTCAACCACCTGCTTCCTCTAATGTGAGCAATTCCTCAGCTCCGAGCTTAAATGCTGCCAATAATAATAACTTAAATCCAATTGCAAACCTTTTAAGCTCATTGGTTGCAAAGGGTTTGATATCTGCCGAAACAGAATCGCCAACTGTGGTACCAAGCGAGGTGCCGATGGGATCCAAAGATCAAACTGAAATCATTACCGCCAGTTGCTCTTTACCAGTTACATCAGTTTCTGGTTCTGCAGCTGTCCCAGTATCATCCAGAGATGAGGTAGATGCTGCTACAAAAACCTCGCTTGCCTTGCCTCAATCAACTAGCACAGAAATCAGAAGTCTAATTGGCTTCGATTTTAGACCTAGCGTAATTCGAGAATTCCATCCAACTGTAATTAGTGAATTATTGGATGATTTCCCTCATCATTGCAAAATTTGCAGTATTAGGCTTAAACAAGAAGAACAGTTGAATAGACACTTGGAGTGGCATGCCACAAGAGAACAGCATGGTCTAATTAAGGGATCAAGAGGTTGGTATGCAAAGTCAAGTGATTGGGTTGCTGGCAAGGCAGAATATTCATCTGAGTTTGAGTTTACCAACTCTGTTGATGTACATGATGACAAAAAAACAGACAGCAGTCAATTGGATACGATGATTCTAGCAGATGAAAACCAGTGCCTATGTGTCTTGTGTGGGGAGCTATTTGAAGATGTGTACTGTCAGGAAAGGAACGAGTGGATGTTCAAAGGGGCCGTTTACATGAACTACTCAGATATCAATAGTGATATTGACTGTAGAAATGTGGGTCCCATCATTCATGCCAAATGCTTATCTGAGAACTCAATTGCCACCAATTTG 2715 0.4284 LTTFQVPSDQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDPSVHSSMKHLFGTWKGVFPPQSLQMIEKELGFAPAVNGSALVSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSRSKGVVNDMTGAILNSNEDSERPDRALGAARPWLDPRINMQWCILQNNQQHRDAFNDSVPEKSISGSYGGSEYSSGISSNLIPGAGRTGSRLIDLGHETISGQRNVFSLKHNFSNHEAPKSMYLDAHRQPRQYITNIQSNVMSGNWKTSEEEEFTWDEMNSGLTDHGPNVSSSLGTESWMADDENLEGEDHLQITRPFGTKVDREISTVKKQLPGFGGHPPSWQLPKDHSIDKLNLKPGYSEGFVSTLSGLPANASPLAVKKGTQSFIPNAVVGMDKIVGQFNSGETESPSGKSPLRQQSPPLLGTVHHPHSMQNLVEQEIPQNIKTSQFLGGPRSQHIRDPSPTLRPIVPVGNLRISQEKDMHGPLSSVTSYRPKLQQHNLGPSQTEITAKTKQPQSKISLAKENSEQSTTNNLSAAAVKSGIIPKKSITNNLDPRKLPSQSGLQPIRSGRSSPTTLISSGSAVASPSSLDPLHNGSSTLPKKPQRKAGQPPQRLSTQPPASSNVSNSSAPSLNAANNNNLNPIANLLSSLVAKGLISAETESPTVVPSEVPMGSKDQTEIITASCSLPVTSVSGSAAVPVSSRDEVDAATKTSLALPQSTSTEIRSLIGFDFRPSVIREFHPTVISELLDDFPHHCKICSIRLKQEEQLNRHLEWHATREQHGLIKGSRGWYAKSSDWVAGKAEYSSEFEFTNSVDVHDDKKTDSSQLDTMILADENQCLCVLCGELFEDVYCQERNEWMFKGAVYMNYSDINSDIDCRNVGPIIHAKCLSENSIATNL 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14106g00001 905 MobiDBLite consensus disorder prediction 553 639 - -
Mupr14106g00001 905 ProSiteProfiles CID domain profile. 1 83 IPR006569 -
Mupr14106g00001 905 MobiDBLite consensus disorder prediction 455 474 - -
Mupr14106g00001 905 MobiDBLite consensus disorder prediction 502 539 - -
Mupr14106g00001 905 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 5 899 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Mupr14106g00001 905 CDD CID_Pcf11 5 72 IPR047415 -
Mupr14106g00001 905 Pfam CID domain 5 73 IPR006569 -
Mupr14106g00001 905 SUPERFAMILY ENTH/VHS domain 4 83 IPR008942 -
Mupr14106g00001 905 ProSitePatterns Zinc finger C2H2 type domain signature. 762 782 IPR013087 -
Mupr14106g00001 905 Gene3D - 2 80 IPR008942 -
Mupr14106g00001 905 MobiDBLite consensus disorder prediction 406 432 - -
Mupr14106g00001 905 SMART 558neu5 1 80 IPR006569 -
Mupr14106g00001 905 MobiDBLite consensus disorder prediction 406 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14106g00001 Mupr-Chr14106 232 4692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14106g00001 734 898 C2H2 Transcription Factor Family AT4G04885 36.416 4.18e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr14106g00001 CID 4.5e-09 CL0020