LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14104g00002	ATGGCAGCGAGAAATGTGTGTTGTTGTTCTATTGGAGATGCATGCCTAGCAAGCTTATCGTGGCGGCTTACAAGCCTTCTCTGCGCACACGTTGCCGTTGCCGGTTTGCATCTTCTCATGGAGAGGAAAACAACTGGGTTTTTGTTCTTCCTCCTTCTTCTCTTAGCCGCTGATGTGGCGGTGAAGACAGCAGAGGCGAGATATTGCTTTACAGAGAGCCATCGGTTCGGCGGTTTATGCTTAAGCTACAGAAACTGTGGACATGTATGCAAGACCGAAGGTTTCACCGGTGGCGAATGCAGAGGCTTCCGTCGCCGCTGCTTTTGCACCAAGATTTGTTGA	342	0.5029	MAARNVCCCSIGDACLASLSWRLTSLLCAHVAVAGLHLLMERKTTGFLFFLLLLLAADVAVKTAEARYCFTESHRFGGLCLSYRNCGHVCKTEGFTGGECRGFRRRCFCTKIC	113

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14104g00002	113	ProSitePatterns	Gamma-thionins family signature.	67	90	IPR008176	GO:0006952
	Mupr14104g00002	113	PRINTS	Purothionin signature	68	83	IPR008176	GO:0006952
	Mupr14104g00002	113	PRINTS	Purothionin signature	98	112	IPR008176	GO:0006952
	Mupr14104g00002	113	SUPERFAMILY	Scorpion toxin-like	67	113	IPR036574	-
	Mupr14104g00002	113	Gene3D	-	67	113	IPR036574	-
	Mupr14104g00002	113	Pfam	Gamma-thionin family	67	113	-	-
	Mupr14104g00002	113	SMART	gth_4	68	113	IPR003614	GO:0006952
	Mupr14104g00002	113	CDD	Knot1	78	110	IPR003614	GO:0006952
	Mupr14104g00002	113	PANTHER	DEFENSIN-LIKE PROTEIN 1	45	113	-	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14104g00002	Mupr-Chr14104	13029	13687	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14104g00002	39	113	Plant Defensins Gene Families	AT2G02100	49.333	1.44e-21	79.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14104g00002	-		-	jre:108983841	81.2629

Showing 1 to 1 of 1 entries