Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14104g00002 ATGGCAGCGAGAAATGTGTGTTGTTGTTCTATTGGAGATGCATGCCTAGCAAGCTTATCGTGGCGGCTTACAAGCCTTCTCTGCGCACACGTTGCCGTTGCCGGTTTGCATCTTCTCATGGAGAGGAAAACAACTGGGTTTTTGTTCTTCCTCCTTCTTCTCTTAGCCGCTGATGTGGCGGTGAAGACAGCAGAGGCGAGATATTGCTTTACAGAGAGCCATCGGTTCGGCGGTTTATGCTTAAGCTACAGAAACTGTGGACATGTATGCAAGACCGAAGGTTTCACCGGTGGCGAATGCAGAGGCTTCCGTCGCCGCTGCTTTTGCACCAAGATTTGTTGA 342 0.5029 MAARNVCCCSIGDACLASLSWRLTSLLCAHVAVAGLHLLMERKTTGFLFFLLLLLAADVAVKTAEARYCFTESHRFGGLCLSYRNCGHVCKTEGFTGGECRGFRRRCFCTKIC 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14104g00002 113 ProSitePatterns Gamma-thionins family signature. 67 90 IPR008176 GO:0006952
Mupr14104g00002 113 PRINTS Purothionin signature 68 83 IPR008176 GO:0006952
Mupr14104g00002 113 PRINTS Purothionin signature 98 112 IPR008176 GO:0006952
Mupr14104g00002 113 SUPERFAMILY Scorpion toxin-like 67 113 IPR036574 -
Mupr14104g00002 113 Gene3D - 67 113 IPR036574 -
Mupr14104g00002 113 Pfam Gamma-thionin family 67 113 - -
Mupr14104g00002 113 SMART gth_4 68 113 IPR003614 GO:0006952
Mupr14104g00002 113 CDD Knot1 78 110 IPR003614 GO:0006952
Mupr14104g00002 113 PANTHER DEFENSIN-LIKE PROTEIN 1 45 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14104g00002 Mupr-Chr14104 13029 13687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14104g00002 39 113 Plant Defensins Gene Families AT2G02100 49.333 1.44e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14104g00002 - - jre:108983841 81.2629