Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1409g00001 ATGGAAGGAGAAGGAGAAGGAGGAGGAAGCGGTAGGAAGAGAGGGAAAGAGGGTGAGATACGCTACAAAGGAGTCAGGATGAGGAAGTGGGGCAAGTGGGTCGCTGAGATTCGAGAGCCCAACAAGCGTTCTCGTATTTGGCTCGGTTCCTATTCCACTCCCGTCGCCGCCGCCCGTGCATACGACACCGCCGTCTTCTACCTCCGCGGACCCTCCGCCCGCCTCAACTTCCCCCACCTTCTTGCCGCTGAAGGCCCCGCTTCTGACCTCTCTGCCGCCTCCATCCGCAAGAAAGCCACCGAGGTCGGCGCCAGAGTCGACGCCCTCCACCGCCATCACCCTCACGCCGGAGAATTCGCCGACCGGGTCGACCTCAACAAAATCCCCGAACCCGATTATTCGGATTCTGACTGTGACTGGGACCGGGATTAG 432 0.6065 MEGEGEGGGSGRKRGKEGEIRYKGVRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPHLLAAEGPASDLSAASIRKKATEVGARVDALHRHHPHAGEFADRVDLNKIPEPDYSDSDCDWDRD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1409g00001 143 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Mupr1409g00001 143 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Mupr1409g00001 143 PRINTS Ethylene responsive element binding protein signature 60 80 IPR001471 GO:0003700|GO:0006355
Mupr1409g00001 143 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Mupr1409g00001 143 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 136 - -
Mupr1409g00001 143 FunFam Ethylene-responsive transcription factor 2 21 79 - -
Mupr1409g00001 143 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Mupr1409g00001 143 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Mupr1409g00001 143 MobiDBLite consensus disorder prediction 120 143 - -
Mupr1409g00001 143 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Mupr1409g00001 143 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1409g00001 Mupr-Chr1409 25279 25710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1409g00001 22 138 AP2-EREBP Transcription Factor Family AT3G50260 61.832 2.43e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1409g00001 AP2 9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1409g00001 K09286 - gmx:100784157 221.861