Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1408g00001 ATGCTTTGTTTCGGCTCAAGCTGTTTACTTTCTGCTACCTTAGTTCACACTGTTGTTTCTTCAAAGTTTCCTCAAAGACTCACACTCAGTCACCACCACATTCACCTTTTCTCTGTTTCTGACGGATGGGATTTTATGATGAGGAAGACAAGAGATAGTTGGATTAGTTTTGACTTTGATATTATTGTTTTTGACATAGAAATAGTTGTCAACATGGCTGATTTTGAGAAAGATGAGGTGCCAATTTTTTCAGATATTCATCCCAAACTATCAAATGAACCTGTTGATTCTAAGTTCCCGAGCTGTGTACCTAGGACACGAAGTGTATCAATCTCTATTCCCACGATACTCATGGAGCCACATGAAAGAGATATTAATCTTGTGGGATTCACTGGTCCCCTTCGGAGTCAGAGAAAAACTCCATTTAATCAAATGAGTGGTCCATTGTATGTTACTCATAGACCTGGAAACATTTTCCAGCAGAATCGAGTGGCACCAGAGTACCAAACAGCAGAAAGTAAGACAGAAAAATTTCCTTCATGCTGTGGCATGCGTGAAAATGGTTTGCAGAACAACTATGTTGGAAAGAATGAACATTTAGTTAGGTCTGGTCCACTAGGAATGTGTAATGATCCATATTGTACAACTTGCCCAACTTACTTCAATGCTACTCAACAAAGGAATTCAAAAGCTTCGGGTATATTCAGTCCTAAGTTTCGCAATACCCTTTATGGGGATGCCAGGGATTGGGCAAGAAGAATTTTTGCTTTCTTGATTCCAAATGTTCCTAGAGTTATGAATCCTCATAATGAACTTGTACAACAATGGAATAAAATTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTCTGTGCAGAAGGAAAATAAATGTATTGTTATAGACTGGACTATGACAAAAATGCTTGTTGTACTTAGAAGCATGAATGATTTCATACACTTCCTAAACATTGTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCTATGGTGGTTGGTGCCGGGGAGTTAGTTGACCATCCTAAGAAAATAGCTCTTCACTACCTTCAGACATCTTTTATTATTGACTTATTTGTTGTACTTCCACTTCCTCAGATATTCATATGGTTTGTCCTACCAAAGCACTTGACGTCGGGGTCATCAGGAGCAAACTATGCAAATAATCTTTTGCGTATTGTGATCCTTGTTCAATATATTCCCAGATTGTGTAGATTTCTTCTTCCTATGCTAATTTCTCCAACTGGATTCATATTTGAGTCTCCATGGGCAAGTTTCTTTATAAATCTTTTTACCTTTATCCTATCTGGCCACGTTGTCGGGTCCTGGTGGTACCTCTTTTGTGTGCAGAGGGTTAATCAGTGCCTACGAGATGCTTGCAAGAAATCATTCAAAACACATATTGAAGCATGCACAAAATTCATCGATTGTAGTAGGCATGGACAAGCTAAAGTATATCAGGATGACAAAATGTGGCATAATTGGACGAACAGTTCTTTTGCAAGTGCTTGTTTTACTGAAGATGGTTTTACATATGGAATCTTTAATAAAGCTGTCAACCTTACTGCAGATCGTAATGTGATCACTAGATATGTATATTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGCAATTTAACCCCCAGCTATTTGGTTGGGGAAGTCCTTTTTACCACAGCAATCATAGGAATGGGATTGTTGCTGTTTGCTCTTCTCATTGGAAACATACAGAACATTCTTCAGGCTCTTGGACGCAGGGGGCTAGAAATGTCACTTAGACGACATGATGTTGAGCAATGGATGAGCCATCGGCGTTTAGCAGAAGACCTGAGAAGGAGAGTGCGACAGGCTGAACGCTATAACTGGGCTGCAACAAGGGGGGTGAATGAAGAATTACTCCTGGAGAATTTGCCAGAAGACCTCCAAAGGGACATCAGACGCCATCTCTTTACATTTATTAAGAAAGTTCGAATTTTTGCCTTGTTGGATGAGCCTATCTTGGATGCCATCTGTGAGAGGCTAAGACAAAAAACATATATCAAAGGAAGCAAAATTTTGTATGATGGTGGTTTGGTGGAGAAGATGGTTTTTATTGTGCGTGGAAACTTGGAGAGTGTTGGCGAAGATGGAATTAGTGCTCCCCTTTATGAAGGGAGTGTTTGTGGTGAAGAACTTCTCACATGGTGTCTTGGGCATCCTTTAGCATGCAAAGGTTGTGAAAAAGCAAGGATTCCAAGGCAAAAGTTGGTTAGTAACCGGACAGTATGTTGCTTAACAAATGTGGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAGGCCTGTTTGCAAGATTCTTTCGGAGTCCTCGTGTTCAAGGAGCCATAAGGTACAACTCACCTTATTGGAGATGCCTTGCAGCAACAAGCATCCAGAATTATCAAGGAAACATGGCTAATTTTGAAAATGACAAGCTGCTGATGCTGTCAGATGCAGATGCGCAATCATATGATGAACCCTTGGATTTTAAATTCCGAAGGATAGTAACCAGGACACAAAGTGCATCGATTTCTGTTCCTATGGGTTCCTTGGAGTCATATGAGAAAGAAACTAGTCTCGTGGGACACACTGGTCCTCTTCAGAGCAAGGGAAAAACATCCTTTATGCAGATGAGTGGTCCACTATATGCTACCACTGGAACTGAAAATCTTTTGCAGAAGCATAATGCTGTATCGGGAAACAAAGCAGAGGAGAGAAAGACAGATAATTTTGCTACTTTCCGCAGCATGGGTTCAAATTACTGGAACAATGATTCTGATAGAAAAAATGAACACTTACTGAGGTCTGGGCAACTGGGGATGTGCAATGATCCTTATTGTACTACTTGTCCTATTTACTTCAATGCTTATCAGCAAAGATATCCAAAACCTTTGACTAGATGGGATCCAAAGTTCCATAATTCTCTTTATGGGGATGCCAAGAGTTTCGTGAGAAAACTTCTTTCTTTCTGCTCTTCTTATGTTCCTGGAGTTATGAACCCTCACGCTAAATTTAGGTTAGCTTATATTTCTCGTGAATCGAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTCATTACCTAAAGGATAATGATATTGTTTGTCCTACCAAATTCCTTGTGGGGAGCAAATTATGCGAAGAATCTTCTACGTGCAGCGATCTTGGTGCAAGGGTTAATCAGTGTTTGCGGGATGCTTGCCATAATTCTAATATACTTGGATGCATGAAGTTCATTGATTGTGGACGTGGCCATGGAAATGATCAGCCTGGCTTAATATCAGAACAGTGGATCAACAATACCGATGCTGTTGCTTGTTTGGAACCCTCTTCTGATGGTTTCCCTTACGGGATTTATGAGAATGCTGTACCACTTACTATAGAAATTGACGTGGTCAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCTAGTTCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCAATTCTGATTGGAAACATACAGAACTTTCTACAGGCTCTTGGACGGAGGAAGCTGGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGGCGTTTACCAGAAGATCTTAGAAAGAGAATAAGAGAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGGGTGGATGAAGAAATGCTCATGGAGAATTTGCCAGAAGATCTGCAGAGAGACATAAGACGCCATCTCTTCAAATTTGTTAAGGAAGTTCGGATTTTTGCTCTGATGGATGAGCCTATCTTTGATGCCGTTTGTGAGAGATTAAGACAAAAGACATACATCAAAGGAAGTAAAATTCTGAGTCAAGGTGGTCTGGTAGAGAAGATGATATTCGTGGTGCGTGGTAAATTGGAGAGCATTGGAGAAGATGGAATTGGAATTCCTCTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCAGTCAGCACAGATGGAAGAAAAGTAAGGCTTCCAGGACAGAGAATGGTTAGCAACAGGACAGTAAGGTGCTTAACAAATGTGGAATCATTTTCACTCTCTGCTTCAGACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGTAGTGCATCTGTTCAAGGAGTCCTAAGGTATGAGTCACCTTATTGGAGATCCCTTGCTGCAACCCGCATTCAAGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGTGCCTATTCCTTTCCATCAGATTAA 4398 0.4075 MLCFGSSCLLSATLVHTVVSSKFPQRLTLSHHHIHLFSVSDGWDFMMRKTRDSWISFDFDIIVFDIEIVVNMADFEKDEVPIFSDIHPKLSNEPVDSKFPSCVPRTRSVSISIPTILMEPHERDINLVGFTGPLRSQRKTPFNQMSGPLYVTHRPGNIFQQNRVAPEYQTAESKTEKFPSCCGMRENGLQNNYVGKNEHLVRSGPLGMCNDPYCTTCPTYFNATQQRNSKASGIFSPKFRNTLYGDARDWARRIFAFLIPNVPRVMNPHNELVQQWNKIFAICCLVAIFVDPLFFFLLSVQKENKCIVIDWTMTKMLVVLRSMNDFIHFLNIVLQFRLAYVAPESMVVGAGELVDHPKKIALHYLQTSFIIDLFVVLPLPQIFIWFVLPKHLTSGSSGANYANNLLRIVILVQYIPRLCRFLLPMLISPTGFIFESPWASFFINLFTFILSGHVVGSWWYLFCVQRVNQCLRDACKKSFKTHIEACTKFIDCSRHGQAKVYQDDKMWHNWTNSSFASACFTEDGFTYGIFNKAVNLTADRNVITRYVYSSFWGFQQISTLAGNLTPSYLVGEVLFTTAIIGMGLLLFALLIGNIQNILQALGRRGLEMSLRRHDVEQWMSHRRLAEDLRRRVRQAERYNWAATRGVNEELLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKTYIKGSKILYDGGLVEKMVFIVRGNLESVGEDGISAPLYEGSVCGEELLTWCLGHPLACKGCEKARIPRQKLVSNRTVCCLTNVEAFSLRAADLEEVTGLFARFFRSPRVQGAIRYNSPYWRCLAATSIQNYQGNMANFENDKLLMLSDADAQSYDEPLDFKFRRIVTRTQSASISVPMGSLESYEKETSLVGHTGPLQSKGKTSFMQMSGPLYATTGTENLLQKHNAVSGNKAEERKTDNFATFRSMGSNYWNNDSDRKNEHLLRSGQLGMCNDPYCTTCPIYFNAYQQRYPKPLTRWDPKFHNSLYGDAKSFVRKLLSFCSSYVPGVMNPHAKFRLAYISRESRVVGAGDLVDHPKKIALHYLKDNDIVCPTKFLVGSKLCEESSTCSDLGARVNQCLRDACHNSNILGCMKFIDCGRGHGNDQPGLISEQWINNTDAVACLEPSSDGFPYGIYENAVPLTIEIDVVNKYVYSLFWGFQQISTLAGNLVPSYFVWEVLFTMAIIGLGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRKRIREAERYSWAATRGVDEEMLMENLPEDLQRDIRRHLFKFVKEVRIFALMDEPIFDAVCERLRQKTYIKGSKILSQGGLVEKMIFVVRGKLESIGEDGIGIPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRMVSNRTVRCLTNVESFSLSASDLEEVTILFTRFLRSASVQGVLRYESPYWRSLAATRIQVAWRYRKKRLSRAYSFPSD 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1408g00001 1465 CDD CAP_ED 1297 1413 IPR000595 -
Mupr1408g00001 1465 ProSiteProfiles cAMP/cGMP binding motif profile. 676 753 IPR000595 -
Mupr1408g00001 1465 Gene3D Helix hairpin bin 607 668 - -
Mupr1408g00001 1465 Gene3D Helix hairpin bin 1225 1289 - -
Mupr1408g00001 1465 SUPERFAMILY cAMP-binding domain-like 606 799 IPR018490 -
Mupr1408g00001 1465 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 209 831 - -
Mupr1408g00001 1465 SUPERFAMILY Voltage-gated potassium channels 268 599 - -
Mupr1408g00001 1465 SMART cnmp_10 1297 1432 IPR000595 -
Mupr1408g00001 1465 SMART cnmp_10 676 811 IPR000595 -
Mupr1408g00001 1465 Pfam Ion transport protein 277 602 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr1408g00001 1465 SUPERFAMILY Voltage-gated potassium channels 1163 1225 - -
Mupr1408g00001 1465 Gene3D Jelly Rolls 1295 1419 IPR014710 -
Mupr1408g00001 1465 Gene3D Jelly Rolls 674 798 IPR014710 -
Mupr1408g00001 1465 CDD CAP_ED 676 792 IPR000595 -
Mupr1408g00001 1465 Gene3D - 266 601 - -
Mupr1408g00001 1465 ProSiteProfiles cAMP/cGMP binding motif profile. 1297 1365 IPR000595 -
Mupr1408g00001 1465 SUPERFAMILY cAMP-binding domain-like 1225 1415 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1408g00001 Mupr-Chr1408 1559 25193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1408g00001 76 748 Ion Channels AT3G17700 58.850 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1408g00001 K05391 - gmx:100795955 1316.21