Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14081g00005 ATGGCATACCAAGCGATCCAGGGCCCCAGTTCGGGATCGAGTTCGAGTTCGGGGTTTCAGTTATTGAACTCTCCATTCGGAGACACCACTTATACCAAAGTCTTTGTTGGAGGATTGGCCTGGGAGACTCAGAGCGAAACCATGCGTCGCCACTTCGAGCAGTTCGGTGAGATTCTCGAGGCCGTCGTAATCACTGATAAAAACACCGGCCGATCCAAGGGCTATGGTTTTGTGACTTTCCGGGATCCCGAGGCTGCAAGGAGAGCGTGTGCTGATCCAACGCCTGTCATTGATGGGAGAAGGGCGAATTGTAACTTGGCTTCACTTGGTCGACCACGGCCCCCTCTGCCATATGGACGGATAAGACCTGCCTCCCCTTATGTTGGAAATTTGCAACCAGCCCGTGGTGCTTATGTTGGAAGCTTTGGTTACCAACAACCACTTTCCTACAGCTATCAACAAGGAATGGTTTACCCTCCTTACGGGTATACGACATATGGAGCTGAGTACGTCTACCCACAGAGTCTGTACAACCCATATATGGGGCAACAGTACCTTCAGATATATGGAGTGCCTGGGGCAGTGAATACGACTATTTATCCTTATGGACAATTGGGTCAGGCTATTCCTAGTGGTCATGGCTATTCGGCAATGCAGGGCTATACAGTACCAGGTCATCAGATTGTGCCCTACGGTGGATCCAATGTTAATGCCATAACAACTTCACCTATGCCTGCCATTCAAGCTTCATATCCTAGTGGAATTGCTGCACCAGTTCCTGGCCAACCACAATTTATTGTTCCTGCTCCTTCTCCTCAGTTTATGCAAGGCAGCGCAGGACTAAGAGCAGCGGAACTGCTACTTGAGTGGCGGGCTTCCAATCTAGCCTTGCAAGTCATATATAGTCATGCTCACCAAGTTGTGTCTGAGTCGCTCCAGATGGCAAAGGAAATTGGATCGTGCGGGATGCTTTTCCATTTGGACATTTACACTAGTGTATTTATACCTAATACTACCTGTACTCAGGAAGAGTGGCAGTAG 1041 0.4918 MAYQAIQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGNLQPARGAYVGSFGYQQPLSYSYQQGMVYPPYGYTTYGAEYVYPQSLYNPYMGQQYLQIYGVPGAVNTTIYPYGQLGQAIPSGHGYSAMQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSAGLRAAELLLEWRASNLALQVIYSHAHQVVSESLQMAKEIGSCGMLFHLDIYTSVFIPNTTCTQEEWQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14081g00005 346 Gene3D - 27 111 IPR012677 -
Mupr14081g00005 346 SUPERFAMILY RNA-binding domain, RBD 31 133 IPR035979 GO:0003676
Mupr14081g00005 346 PANTHER BOULE-RELATED 10 249 - -
Mupr14081g00005 346 SMART rrm1_1 33 105 IPR000504 GO:0003723
Mupr14081g00005 346 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 26 113 - -
Mupr14081g00005 346 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 90 IPR000504 GO:0003723
Mupr14081g00005 346 CDD RRM_RBM24_RBM38_like 32 107 - -
Mupr14081g00005 346 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14081g00005 Mupr-Chr14081 20747 24619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14081g00005 21 108 C2H2 Transcription Factor Family AT2G19380 43.182 7.31e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14081g00005 - - gmx:100779244 526.554