Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14081g00002 ATGGCGGGGGAAAATATTTCAATCCAGTGCGCGAACGCAAAATTTGAAAAGGAAAGAAAAAAGAAAGTAGACGTACGAAGTAGAAAAAGGAAAGATGATGATTGTATAGAGGCGTATAGTGAGCTACTTGGAACAAATGATAGAATTGCAGTTGTTGTTGTTGTTGAATCATCGCAGCGATTCCAAGACCAAAACCTAAGTATGTCGGGATCTGACATGGCGGGCAGGGAGCAATTCGCGGTCGGGATGCACAAACCCCAACCCCAATCCCAACAGCAACCTCAACTTCACCAAAACATGCGTTTGGACTATGCTGCTGACGCCACCGTTGTTTTCGCCGCCCCTACCGTCAACATTAACGGCGGAGATTCCTCTGCAGCAGCACTGCCTCCGGGCCTTGGCCTGCCTCAGGATCAGGCCCAGCCCCTGCCCCGGCCCATCTTCGGTAGCCCCTCAGAATCGGCCAAGAGAAAGAGGGGCAGGCCCAGGAAATATGGGCCTGACGGTGGCATGGCGTTGGCCTTGACCACTTCCTCTCCTCCCGGCGCCGCCGCCGCACCGGTTAGCCACTCCGGTGAGGCATTTCCACCGGCTCTCCCTTCCGATTCTGCTTCTGCCGGCTCCGGGAAGCGCAGGGGCAGGCCTCGCGGTTCTCTCAACAAGAATAGCTCAAAGTTTTCGGGTCTAGGAACTTTATTTACACCACACGTCATCACTGTGAAAGCAGGAGAGGATTTGTCATCAACAATTATGACGCTTTGCCAGAGCAGTTCAAGAAATATTTGCATCTTAACAGCAAATGGAGCGATATCGAACGTGACACTTCGACAACCTGCTACATCGGGTGGAACTGTGACTTACGAGGGGCGATTTGAGATCCTATCACTTGGTGGTACTTTGATTCTTGCTGAAAATGATGCTCACGGCGGAAGGATTGGGGGCTTGAGTGTGTCCTTGTCGGGGCCTGATGGCCGTGTCTTGGGTGGCGGAGTTGCAGGTCTTTTGATAGCTGCTTCCCCTGTTCAGCTAGTTTTGGCGAGCTTTGTTTCAGATGTTCGCAAGCAATCCAAGTCTGCAAAGAGGATGGAGAATGCATCTTCTGCAGCAGCAAAGGCTTCCACGGCAGCAGGCCAAAGCAGCTCGCCATCAAGGGGCACTCTCAGTGAGTCTTCTGGTGGGGCTGGGAGTGGGAGTCCCCTAAACCAAAGCACAGAAGCCTGCAACAACAACAACAATAATACCCCACCACAAGGCTTTTCAGGCATGCCCTGGAATTATGATTGA 1284 0.5234 MAGENISIQCANAKFEKERKKKVDVRSRKRKDDDCIEAYSELLGTNDRIAVVVVVESSQRFQDQNLSMSGSDMAGREQFAVGMHKPQPQSQQQPQLHQNMRLDYAADATVVFAAPTVNINGGDSSAAALPPGLGLPQDQAQPLPRPIFGSPSESAKRKRGRPRKYGPDGGMALALTTSSPPGAAAAPVSHSGEAFPPALPSDSASAGSGKRRGRPRGSLNKNSSKFSGLGTLFTPHVITVKAGEDLSSTIMTLCQSSSRNICILTANGAISNVTLRQPATSGGTVTYEGRFEILSLGGTLILAENDAHGGRIGGLSVSLSGPDGRVLGGGVAGLLIAASPVQLVLASFVSDVRKQSKSAKRMENASSAAAKASTAAGQSSSPSRGTLSESSGGAGSGSPLNQSTEACNNNNNNTPPQGFSGMPWNYD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14081g00002 427 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 99 409 IPR039605 GO:0003680
Mupr14081g00002 427 Pfam Plants and Prokaryotes Conserved (PCC) domain 235 349 IPR005175 -
Mupr14081g00002 427 MobiDBLite consensus disorder prediction 359 427 - -
Mupr14081g00002 427 CDD DUF296 234 348 IPR005175 -
Mupr14081g00002 427 SMART AT_hook_2 156 168 IPR017956 GO:0003677
Mupr14081g00002 427 SMART AT_hook_2 209 221 IPR017956 GO:0003677
Mupr14081g00002 427 Gene3D - 235 366 - -
Mupr14081g00002 427 MobiDBLite consensus disorder prediction 361 420 - -
Mupr14081g00002 427 MobiDBLite consensus disorder prediction 128 225 - -
Mupr14081g00002 427 SUPERFAMILY AF0104/ALDC/Ptd012-like 233 353 - -
Mupr14081g00002 427 ProSiteProfiles PPC domain profile profile. 230 369 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14081g00002 Mupr-Chr14081 1902 5530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14081g00002 147 424 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 52.797 1.89e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14081g00002 - - pvu:PHAVU_009G008300g 434.106