Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1407g00003 ATGGAGGTTGAGGTTTGCATGAACTGTTCGTGCAAGGATCGCTCTGTGCGTGAATGGAAGAAAGGCTGGCCTCTGCGATCGGGTGGATTCGCCAGGCTATGCGACAAGTGCGGATCTGCCTATGCCAATTCAACTTTCTGTGATAAATTCCACCAACATCAAACTGGTTGGAGAGAGTGCAGCTGTTGCAACAAGATTATCCACTGTGGATGCATAGTATCAAGGTCCTTGTTTGAGTACCTTGATTTTGGCGGTATAGGTTGTGTTACCTGTGTAAAAACTTCCCAAATTCCTTTGATACGGGATACTGAAAATCCTAATGGGGCTGTTAGATCAATAAAAAATAATGCAAGTGATCGTCATACTGAACATATTGATGGTAGACTATTGGTGGATGGTGCTGGCAAAGGAAAACTCAAGCAATTGTGTAGAATTGGTGAAGCTAGTGAATCCAGCCGTTGGCCTCAAGCTGAGAGAGATGGCATGGATTCATGTATTGGTTCAAACCGGCAACAGGATAGAAGATTTTCAAATGTGATGAAACCGGCTAATCATTCAATAACATTCACTACATTAGAAAATAATAGGCCAACATGGGAGACTAAAAGTATGCACAAATCAAGTTCACTGAATATTTCTCTGGGAACCTCATCAGCAAATTCTGTCCTGCCTTCTGCTTTAGAGATTATAGAAGGGAGACTTGAGGGTAAAGCATCGTCTTGTCCCTTTCATCAAGGGCAAAGATCTCTCTCCATATTGTCTAAACCATTGATGAATGGGATAACAATGAATTTGGAAGCAAATAAAGGCCTGACTTCTCAGGAACGCATTGCCCGGCCACCTGCTGATGGGAGAGGCAAGAATCTGTTACTTTCTCGATACTGGCCTAGGATTACTGATCAAGAGCTGCAACAATTGTCGGGAGATTTGAACTCTATTATAGTGCCACTATTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAATCCTGCGCAGAGGCTTACTTTCCTCCTATTTCACAGTCAGAAGGTCTTCCTTTGCAGATACGAGATGTGAAGGGGAATGAGTGGATATTTCAGTTCAGATTTTGGCCTAATAACAATAGTAGGATGTATGTATTGGAGGGAGTAACACCTTGCATACAGGCCTTGCAATTAAATGCTGGTGATACTGTGATATTTAGTCGGATAGATCCTGGAGGCAAATTTGTTATGGGTTACAGAAGGACATCAGATTCTATAGATACACAGGATGCCTCTATTTCTGCTCTTTCTAATTGTTTTTCAACAAAGGAAACGACCTTTTCTGGTGCAACTGCAAATCTGTACTCAGGAAGTAGTTATCCTGATCTTCTCCAGACAAGGAAAGTGAATGGCGAACCTTACTTAAATGGATGTTCAGAACATTTGCGTTTGGGTACTGGAACTGCTCATGGTCTTCAGCCTGAAAATTTTGAGATGGTAAACAATGATTTGTTGCAGCAATTGATTTCAGTTTCAGAGAAGAGGACTCAAAATATTGGGCCTATGAGTAAGAGATTTCTCATACATAATGAAGATGCTAAGGAGTTGAGACTTACATGGGAAGAAGCACAGGAATTGCTTCGTCCCGCGCCTAGTGTCAAGCCAACTATTGTAAAAATTGAGGACCAAGAATTTGAGGAATATGAGGAACCCCCGGTGTTTGGAAAGAGGACTACAATCAATGCCCATCATTCTAGGTCTTTGAGCTCTGCATCAGAGGAAATGAGTCCAAAGGAATTAGAAAATATTCCAGTAACCAGCAAA 1812 0.4205 MEVEVCMNCSCKDRSVREWKKGWPLRSGGFARLCDKCGSAYANSTFCDKFHQHQTGWRECSCCNKIIHCGCIVSRSLFEYLDFGGIGCVTCVKTSQIPLIRDTENPNGAVRSIKNNASDRHTEHIDGRLLVDGAGKGKLKQLCRIGEASESSRWPQAERDGMDSCIGSNRQQDRRFSNVMKPANHSITFTTLENNRPTWETKSMHKSSSLNISLGTSSANSVLPSALEIIEGRLEGKASSCPFHQGQRSLSILSKPLMNGITMNLEANKGLTSQERIARPPADGRGKNLLLSRYWPRITDQELQQLSGDLNSIIVPLFEKVLSASDAGRIGRLVLPKSCAEAYFPPISQSEGLPLQIRDVKGNEWIFQFRFWPNNNSRMYVLEGVTPCIQALQLNAGDTVIFSRIDPGGKFVMGYRRTSDSIDTQDASISALSNCFSTKETTFSGATANLYSGSSYPDLLQTRKVNGEPYLNGCSEHLRLGTGTAHGLQPENFEMVNNDLLQQLISVSEKRTQNIGPMSKRFLIHNEDAKELRLTWEEAQELLRPAPSVKPTIVKIEDQEFEEYEEPPVFGKRTTINAHHSRSLSSASEEMSPKELENIPVTSK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1407g00003 604 FunFam B3 domain-containing transcription repressor VAL1 296 423 - -
Mupr1407g00003 604 ProSiteProfiles B3 DNA-binding domain profile. 318 419 IPR003340 GO:0003677
Mupr1407g00003 604 CDD B3_DNA 316 417 IPR003340 GO:0003677
Mupr1407g00003 604 SMART B3_2 318 418 IPR003340 GO:0003677
Mupr1407g00003 604 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 582 - -
Mupr1407g00003 604 MobiDBLite consensus disorder prediction 566 604 - -
Mupr1407g00003 604 Gene3D - 296 422 IPR015300 -
Mupr1407g00003 604 Pfam B3 DNA binding domain 318 417 IPR003340 GO:0003677
Mupr1407g00003 604 SUPERFAMILY DNA-binding pseudobarrel domain 316 418 IPR015300 -
Mupr1407g00003 604 MobiDBLite consensus disorder prediction 576 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1407g00003 Mupr-Chr1407 26856 34085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1407g00003 3 574 B3 DNA Binding Superfamily AT4G32010 46.007 1.50e-156 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr1407g00003 B3 6.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1407g00003 K09287 - gmx:100799429 933.71