Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14077g00001 ATGGATTCGCTTCAAATTCAACCCTCTTCAACCAAGGTTGAAAGAAGGCTCGTCGAGAAAAACAGAAGAAACCAGATGAAGATCCTCTACAACAAACTCAACTCTCTTCTCCCTAGCTACAACCCCAAGGAATCAGTACCACTGCCTGACCAAGTGGATGAGGCAATCGATTACATAAAGAGTTTGGAGGCAAAGGTGAAGGTGGCGAAGGAGAAGAAAGAGAACTTGCAGGGAATTAGGAAGAGGTCTCGTGGTTGCTTCTCAGATAACAGTGATAATTTTGCTGCAACAGGTTCACGAAAACCGCCACAATTTGAGATTCATGAAGTGGGTTCCTCTCTGCAAGTTGTTCTGACTTGTGGGTTGAACCACCAGTTCATTTTCTATGAAATCATTCGAATGCTGCATCAAGAGAACATTGAGGTTAGAAGTGTCAATTCCTCACTGGCTGGAGACTCGATGCTTCACGTTGTGCATGCAGAGATTCCTCAATCTTTTCTTCAATTCGGAGCGACCAAAGTCAGTGAGAGATTGAAAAGGTTGGTGAATGGATCCTGCAGTGATGTGGAAACACTTCCGGAGTTGTGGGATTTTGAAATTGGTAGTGATGATATGTGGGGTTTCTAG 627 0.4402 MDSLQIQPSSTKVERRLVEKNRRNQMKILYNKLNSLLPSYNPKESVPLPDQVDEAIDYIKSLEAKVKVAKEKKENLQGIRKRSRGCFSDNSDNFAATGSRKPPQFEIHEVGSSLQVVLTCGLNHQFIFYEIIRMLHQENIEVRSVNSSLAGDSMLHVVHAEIPQSFLQFGATKVSERLKRLVNGSCSDVETLPELWDFEIGSDDMWGF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14077g00001 208 Coils Coil 52 79 - -
Mupr14077g00001 208 Pfam Helix-loop-helix DNA-binding domain 13 63 IPR011598 GO:0046983
Mupr14077g00001 208 SMART finulus 16 68 IPR011598 GO:0046983
Mupr14077g00001 208 FunFam Transcription factor bHLH162 4 88 - -
Mupr14077g00001 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 77 IPR036638 GO:0046983
Mupr14077g00001 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Mupr14077g00001 208 Gene3D - 3 87 IPR036638 GO:0046983
Mupr14077g00001 208 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14077g00001 Mupr-Chr14077 1711 2678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14077g00001 10 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.889 2.29e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr14077g00001 HLH 3.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14077g00001 - - gmx:100817883 348.591