Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14040g00004 ATGGAAATTGATCTGAACCATGAAGTGACTGAGGTTGAGAAGAATGCATTCTGTGATAGGGAATGTGAGAAAGGTGCTGGTGTTACTTGTTGGTCCTCTTCAACTTGTTCATCCTCTAGTTCCTCTTCAGCTCCTGTGTCCTCTTCTTACCTTGAGCTTTGGCATGCTTGTGCTGGCCCCCTCACTTCTCTTCCCAAGAAAGGAAATGTGGTGGTCTATTTTCCTCAAGGTCACTTAGAACAGGTTGCCTCTTTCTCTCCTTTCACACCAATGGAGATTCCCTCCTATGATCTTCAGCCTCAGATCTTTTGCAGGGTTGTCAATGTCCAGCTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAGGTTACTTTGCTTCACCAGGCTGAGTTGGAAGGGAGGCATTCAGAAGGAAAAGAACTTGAAGAATTGGGAGCAGAAGAGGAGGGAGATGAAAGATCACCAACTAAATCAACCCCTCACATGTTCTGCAAAACACTAACTGCTTCTGATACCAGCACACATGGGGGCTTTTCTGTTCCTCGTAGAGCTGCTGAAGACTGTTTTCCTCCTTTGGATTACAAACAGCAGAGGCCATCACAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGTCACATTTACAGAGGTCAGCCAAGGAGGCATCTACTCACTACTGGCTGGAGTATTTTTGTAAGCCAAAAGAATCTTGTCTCTGGTGATGCAGTGCTCTTTCTAAGAGGTGAAAATGGTGAACTGAGATTGGGAATCAGAAGAGCTGTTCGACCTAGAAATGATCTTCCTGAATCAATTATCGGTAGCCATAACTGCTACCCCAATGTCCTTTCTTCTGTGGCAAATGCAATATCCACCAAAACCAAGTTTCATGTTTTCTACAGTCCAAGAGCAAGCCACGCAGATTTTGTTGTTCCCTACCAAAAATATGTTAAAAGCATCAAGAATCCAGTGAGCATTGGGACAAGGTTCAAAATGAGATTCGAAATGGACGAATCTCAAGAAAGAAGGTGTAGTAGTGGCACGTTGATTGGAACGAGTGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTCAGATGGGATGAGGATATTGAGACTAATCATCAAGATCGAGTATCTCCATGGGAAATTGATTCTTCTGCTCCTCTGCCCCCCTTGAGCATTCAGTCTTCCCCAAGACTGAAGAAACTGCGGACAGGTCTACAGGTTGCCTCACCTAGTCACATCATCACTGCAGCACGAGGCAGTGGGTTGGTGGGCTTTGAGGAGTCAGTAAGATCACCCAAGGTCTTGCAAGGTCAAGAAAATGCAGGTTTTGTGTCCCTCTTCTATGGATGTGACACAGTAACCAAGCCACCAGGTTTTGAGATGAGCTCTACGAGTCATCCAAATCTCGCATCAGCTGAAGTAAGAAAGGTCACCTCTTCTGAGCTTAGTAGTGTTCACCCTTTCAGTTATGCAGGCTTTGTGGAAACTAACAGGTTTCCTAGGGTCTTGCAAGGTCAAGAAATATGTCCTTTGAAATCCCTGACAGGAAAGGTTGATATGAACCTTGGTGCTTGGGGAGTGCCCAATCTAAGTTGCACAACTTTCAACCTCCATCAGGCAACCAAACCCAACTTCCAACCTGCACTTTTTCCTTATGGGGATATTCACCAAGCTGGTCAAGCTAGCTTGTTTTGCTCAAAATCCCCCAGTTTCCAGAGAGAGAATGTCCCATTTAACAAGCCATCCACTCAGGCTGGAATCATTGTAAATGAAGTTGGAAGATCAGATATCCCAAATGAGCATAAGCTGCAGGACAATATTTCTTCTGCTGCTTCATTAGGGGCTGCAAATATGGGGGTTCCAAATGACAACAATGTCCAGGGAAACGTAAATGCCTGCAAACTATTTGGTTTTCCTTTGTCCGGGGAAACTACTGCCCAAAATTTACAGAACTCTGCTAAAAGGAGCTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCTATTGATCTTTCAAGACTGAGCGGCTACAATGATCTGCTGAGTGAACTAGAGAGACTGTTTGGCATGGAAGGCCTTCTAAAAGATCCGGATAAGGGATGGAGGATCCTCTACACTGATAGTGAGAATGACATCATGGTTGTGGGGGATGACCCATGGCATGAGTTTTGTGATGTGGTGTCCAAGATCCATATATATACCCAAGAAGAGGTGGAAAAGATGACAATTGGGATGATGATCAGTGATGACACTCATAGCTGTTTGGAAGAGGCACCAGTGATTATGGAGGCTTCAAAGTCTTCCTCAGTGGGTCAGCCAGATTATTCTCCAACAGCAGTTAGAGTCTAA 2391 0.4483 MEIDLNHEVTEVEKNAFCDRECEKGAGVTCWSSSTCSSSSSSSAPVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASFSPFTPMEIPSYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLHQAELEGRHSEGKELEELGAEEEGDERSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESIIGSHNCYPNVLSSVANAISTKTKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCSSGTLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHQDRVSPWEIDSSAPLPPLSIQSSPRLKKLRTGLQVASPSHIITAARGSGLVGFEESVRSPKVLQGQENAGFVSLFYGCDTVTKPPGFEMSSTSHPNLASAEVRKVTSSELSSVHPFSYAGFVETNRFPRVLQGQEICPLKSLTGKVDMNLGAWGVPNLSCTTFNLHQATKPNFQPALFPYGDIHQAGQASLFCSKSPSFQRENVPFNKPSTQAGIIVNEVGRSDIPNEHKLQDNISSAASLGAANMGVPNDNNVQGNVNACKLFGFPLSGETTAQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFGMEGLLKDPDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIGMMISDDTHSCLEEAPVIMEASKSSSVGQPDYSPTAVRV 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14040g00004 796 Gene3D - 162 266 IPR015300 -
Mupr14040g00004 796 MobiDBLite consensus disorder prediction 135 162 - -
Mupr14040g00004 796 SUPERFAMILY DNA-binding pseudobarrel domain 156 276 IPR015300 -
Mupr14040g00004 796 Pfam Auxin response factor 290 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr14040g00004 796 Gene3D - 663 756 - -
Mupr14040g00004 796 CDD B3_DNA 162 264 IPR003340 GO:0003677
Mupr14040g00004 796 FunFam Auxin response factor 662 756 - -
Mupr14040g00004 796 SUPERFAMILY CAD & PB1 domains 670 746 - -
Mupr14040g00004 796 Gene3D - 327 398 - -
Mupr14040g00004 796 FunFam Auxin response factor 162 266 - -
Mupr14040g00004 796 ProSiteProfiles PB1 domain profile. 667 751 IPR000270 GO:0005515
Mupr14040g00004 796 FunFam Auxin response factor 327 400 - -
Mupr14040g00004 796 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Mupr14040g00004 796 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
Mupr14040g00004 796 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 756 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr14040g00004 796 SMART B3_2 164 266 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14040g00004 Mupr-Chr14040 29364 35186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14040g00004 46 796 B3 DNA Binding Superfamily AT5G60450 60.131 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr14040g00004 B3 1.3e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14040g00004 - - gmx:100783513 1477.23