Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14028g00004 ATGGACCTTCTATGGTCAGAGTCACGTCCATCTGAAAATTTGAACACCCTATTTTCAGAGACTCTACCATGCTCAAAGCCAGTACTTCCCATGGATATCCAAAAGGAGAAGGAAGAAACAAAATATCCCCATGAGTCTGCTCCACACCTTCTACTGGATCTAAGTCTCCCTAGTAAAGATTCAGTTGATGAGTCAAAGCCAGAACTCAACCTCATCAACTGTATTGATACAAATTTGAACATGCACTCCTCAGAATCTAGTCATGGACATGGTGATGAATTGGAGCCAAGGATATTCTCGTGCAACTACTGCCAAAGAAAGTTTTATAGTTCGCAGGCACTTGGGGGACACCAGAATGCGCACAAACGTGAAAGAACATTGGCAAAAAGAGGACACAAAGGTGGTGCTGCAGTTTCACTAGAATTTGGACAGAGATACTCCAGTATGGCTTCTCTTCCTCTGCATGGGTCCTATAACAGGTCACTTGGAATTCAGACGCATTCTATGATCAACAAACCCTCTTATCAAACATCCCTTTTTGGTTTGTCCCGTTCCCATCCTCAAAACGCGTGGCAGAAGCGGCCTATGTATTCACAAGTGGAAGAAAGTGAATCTTCTTTGGCTAGTGGAGTCCCACGGTTAGAAAAGTTTTCTCCAAGGCTGGTGCCAGAGGGATTTGGAGTGACTCCTACTTTGACCCACTTGCAGTTGGAGAAATGGACCTTCTCTATTGGGATCAAACAAGTAGGTGAGGCAAAGGCATGTGAAAATATGGTGAAGCGACAGTGTGATGTTTGCAGACATATATGGATTCAGGATTCTGGTATCTTAATTGTTAATTGCCCAATGTGA 852 0.4366 MDLLWSESRPSENLNTLFSETLPCSKPVLPMDIQKEKEETKYPHESAPHLLLDLSLPSKDSVDESKPELNLINCIDTNLNMHSSESSHGHGDELEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKGGAAVSLEFGQRYSSMASLPLHGSYNRSLGIQTHSMINKPSYQTSLFGLSRSHPQNAWQKRPMYSQVEESESSLASGVPRLEKFSPRLVPEGFGVTPTLTHLQLEKWTFSIGIKQVGEAKACENMVKRQCDVCRHIWIQDSGILIVNCPM 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14028g00004 283 SUPERFAMILY beta-beta-alpha zinc fingers 96 126 IPR036236 -
Mupr14028g00004 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Mupr14028g00004 283 Gene3D Classic Zinc Finger 76 147 - -
Mupr14028g00004 283 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Mupr14028g00004 283 FunFam Zinc finger protein 2 76 145 - -
Mupr14028g00004 283 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 34 200 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14028g00004 Mupr-Chr14028 20629 22623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14028g00004 18 199 C2H2 Transcription Factor Family AT5G10970 43.617 8.04e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr14028g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14028g00004 - - gmx:100812573 324.324