Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14028g00001 ATGGACAATAACGAGGAAATCCCATCGACTCCTGCAACGCCAGGCACTCCTGGTGCACCTCTTTTTGGGGGATTCAGTAATAATAATAATAATAAGAAGAAGTCCCTCCTCAAGAGTTGTAGGTGCTTCAGTGTGGAGGAATGGAGCTTGGAAGATGGAGCCTTACCAGCCGTGTCTTGCTCATTGCCACTCCAACCTCCTCCTGTCTCTCTTGCAAGAAAGGTTGGAGCTGAGCTCATTGGAACCTTCATTCTCATGTTCGCCGCCACCGCTGCTGCTATTGTCAACCAAAAGACTAACGGCTCTGAGACCCTCATTGGCTGTGCCGCCACCACTGGTCTCGCCGTTATGATCGTCATCCTCGCCACTGGTCACATCTCCGGCGCTCATCTCAACCCTGCTGTCACCATTTCCTTTGCTGCATTAAAGCATTTCCCATGGAAGCATGTGCCTGTGTATATTGGTGCACAAGTGTTGGCTTCTATATGTGCAGCATTTGCTCTCAAGGGGGTTTATCACCCTTTCATGAGTGGCGGAGTCACCGTTCCTTCCGGAGGTTATGCTCAAGCTTTTGCTTTAGAGTTCATTATTGCCTTCAATCTCATGTTCGTTGTCACCGCAGTCGCCACCGACACCAGAGCTGTGGGAGAACTCGCGGGAATCGCGGTGGGAGCGACTGTGATGCTCAATATACTCATAGCAGGGCCAGTATCAGGGGGCTCAATGAACCCGGTAAGGACACTAGGTCCTGCTATTGCCGCAAACAACTACAAAGCCATATGGGTCTATCTGATAGCTCCCATACTTGGAGCTTTAGGTGGGGCAGGTACCTATACTGTAGTCAAGCTGCCTGAAGAAGATGATGACGCCAAGGCAAAGGCTTCAATCAGCTTCAGAAGATCAAAGAAGGGAGATGGCGCTGAGAGGAGGAGGAGAAGGGTAATGATGGAAAAGAGAAAGAGCGAAGGAAGCGATGAAGACGCCAAGGATGTCGGCAAGGGCGTCCTTGAGGGAAGCCCC 1020 0.5098 MDNNEEIPSTPATPGTPGAPLFGGFSNNNNNKKKSLLKSCRCFSVEEWSLEDGALPAVSCSLPLQPPPVSLARKVGAELIGTFILMFAATAAAIVNQKTNGSETLIGCAATTGLAVMIVILATGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQVLASICAAFALKGVYHPFMSGGVTVPSGGYAQAFALEFIIAFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPVSGGSMNPVRTLGPAIAANNYKAIWVYLIAPILGALGGAGTYTVVKLPEEDDDAKAKASISFRRSKKGDGAERRRRRVMMEKRKSEGSDEDAKDVGKGVLEGSP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14028g00001 340 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 PRINTS Major intrinsic protein family signature 261 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 PRINTS Major intrinsic protein family signature 149 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 PRINTS Major intrinsic protein family signature 112 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 PANTHER AQUAPORIN NIP2-1 32 291 IPR034294 -
Mupr14028g00001 340 CDD MIP 73 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 FunFam Aquaporin NIP2-1 62 293 - -
Mupr14028g00001 340 MobiDBLite consensus disorder prediction 289 333 - -
Mupr14028g00001 340 Pfam Major intrinsic protein 70 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr14028g00001 340 SUPERFAMILY Aquaporin-like 70 287 IPR023271 -
Mupr14028g00001 340 Gene3D Glycerol uptake facilitator protein. 66 293 IPR023271 -
Mupr14028g00001 340 ProSitePatterns MIP family signature. 130 138 IPR022357 -
Mupr14028g00001 340 MobiDBLite consensus disorder prediction 289 340 - -
Mupr14028g00001 340 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14028g00001 Mupr-Chr14028 1837 6476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14028g00001 3 300 Major Intrinsic Protein MIP AT1G80760 76.948 5.35e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14028g00001 K09874 - gmx:100815637 508.064