Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14025g00001 ATGGGTAACGCTCATCGCCACGGGCATCGCAAACACGGTAATTCCGTCCCTCACAACACGGTTCCTCCATCTCATAAATACAATCCTCAGCCACCATTCTCAGCCAATTCCAATTTCAATTCCAATTCCAATATGCTATCTCTCCCTTACACTTATGTCGACTCCTCTCTCCGCGCCCTCGCCGGCCAAGCCGAGGGTTTCGGCCGCTACGCCATCGGTGGCCTCCATGGCCCCCTTTGCCACGTCACATCTCTAGCAGATGATGGACCGGGGTCGCTGCGTGACGCGTGTCGCAGGAAAGAACCTCTGTGGATTGTGTTCGAGGTTTCCGGCACCATCCACCTCTCCTCGTACTTGAACGTGTCGTCTCACAAAACCATCGACGGTCGCGGGCAGAGGATTAAGCTCAGCGGAAAAGGTTTGCGGCTGAAGGAATGCGAGCACGTGATAATTTGCAATTTGGAGTTCGAAGGAGGCAGAGGACACGATGTTGATGGCATTCAGATCAAACCTAATTCCAAACACATATGGATTGACCGTTGCTCGCTCAGTGATTTTGATGACGGCCTTATAGATATCACCCGAGAGAGCACTGATATTACTATTTCGAGGTGTCACTTCTCTCAGCATGACAAAACCATGCTCATTGGGGCTGATCCCTCGCATGTTGGGGATAGGTGCATCAGGGTCACTATACACCATTGTTTTTTCAATGGGACTCGACAGAGGCACCCTCGTGTTAGGTTCGCCAAAGTGCATCTCTACAATAATTATATCAGAAACTGGGGCATATATGCTGTTTGTGCTAGTGTGGAATCCCAGATATTCTCACAAAATAATATCTATGAAGCGGGGCAGAAGAAGGTGGCGTTTAAGTACCTCACTGAGAAGGCAGCAGACAAGGAAGTGGGAGCAAGTGGTAACATAAGGTCTGAGGGAGACATATTTATAAATGGTGCTGAAGCAGGGTTAATGAATGAGGATGGTGGGTGCAAGTTTCACCCGAGTGAATACTATCCCTCATGGACAGTGGAAGCCCCTACAGAGGATCTAAAACAGATTCTTCATCACTGCACTGGATGGCAATCTGTTGTTAGGCCACTAGATCAAACAGTATTGCATAATAGAAGCTAA 1134 0.4868 MGNAHRHGHRKHGNSVPHNTVPPSHKYNPQPPFSANSNFNSNSNMLSLPYTYVDSSLRALAGQAEGFGRYAIGGLHGPLCHVTSLADDGPGSLRDACRRKEPLWIVFEVSGTIHLSSYLNVSSHKTIDGRGQRIKLSGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLSDFDDGLIDITRESTDITISRCHFSQHDKTMLIGADPSHVGDRCIRVTIHHCFFNGTRQRHPRVRFAKVHLYNNYIRNWGIYAVCASVESQIFSQNNIYEAGQKKVAFKYLTEKAADKEVGASGNIRSEGDIFINGAEAGLMNEDGGCKFHPSEYYPSWTVEAPTEDLKQILHHCTGWQSVVRPLDQTVLHNRS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14025g00001 377 Gene3D - 50 360 IPR012334 -
Mupr14025g00001 377 SMART amb_all 90 288 IPR002022 -
Mupr14025g00001 377 Pfam Pectate lyase 118 281 IPR002022 -
Mupr14025g00001 377 PRINTS Pollen allergen Amb family signature 118 134 IPR018082 -
Mupr14025g00001 377 PRINTS Pollen allergen Amb family signature 63 80 IPR018082 -
Mupr14025g00001 377 PRINTS Pollen allergen Amb family signature 265 284 IPR018082 -
Mupr14025g00001 377 PRINTS Pollen allergen Amb family signature 307 331 IPR018082 -
Mupr14025g00001 377 MobiDBLite consensus disorder prediction 1 38 - -
Mupr14025g00001 377 PANTHER PECTATE LYASE 18-RELATED 54 324 IPR045032 GO:0030570
Mupr14025g00001 377 SUPERFAMILY Pectin lyase-like 61 369 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14025g00001 Mupr-Chr14025 10280 12881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14025g00001 45 370 Polysaccharide Lyase AT3G09540 70.245 9.59e-171 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14025g00001 K01728 - gmx:100814368 669.848