Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13996g00006 ATGCATCACATCGGTGTAGGATTAGCATTCCTGCAAGTTCTGCTGCAGCAGATTCCAAGGAAAAGGTTCAAACTTTCTTTCATGTTTGAACGGGCTATTACCCATTTGGGACCAATTGAGTTGCTTGGAGAGTGTAACATTGGTGCCGGAAATAGTGATGATGCCTTCTATAGGTATAAGATGCCTAGAATGATTACCAAGATTGAGGGTAGAGGTAATGGCATCAAAACAAATATTGTCAACATGGTTGACATTGCTAAGGCATTGGCAAGGCCAGCCTCTTACACAACTAAGTATTTTGGTTGTGAACTTGGGGCCCAATCTAAGTTCGATGAGAAAGTTGGGACTTCTCATGTTAATGGGGCGCACGACACTGCAAAACTTGCTGGTCTTCTGGAGATCTTCATCAAGAAATATGTCCAGTGTTATGGTTGTGGAAACCCTGAAACTGAGATATTGATTACTAAGAACCAAATGATCCAGCTGAAATGTGCTGCCTGTGGTTTTGTGTCAGACGTGGATATGAGAGACAAGCTGACTGCCTTTATTATAAAAAACCCTCCTGAGACAAGGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCCGAGAAGGAGAGACTTAAGGAAGGTGAAGCAGCTGATGAGGAACAAAAGAAAACAAAGAAAGATGCTAAGAAGAAAGGCTCTTCCACTTCCAAGGATGAGACTGCAAAATCGAGCTCTACAAAGAAGAAAGCTAGTGGCTCTGATGAAGATCGTCGATCTCCAACTCACGCCCAAGTTGATGAGAAAGAAGAGACTCCTGATGAAGATGAAGTACAATGGCAAACAGATACGTCATTGGAGGCTGCACGGCAACGTATCCAAGAACAGCTAAGTGCTGTAACAGCTGATATGGTCATGCTCTCCACAGATGAGCCAGAGAAGAAGGAAAATGCTGCAAGTAAGAAGAGTGATGGTTCTGAAAATGGTAACTCAATGCACTACAGGAAACTGGTTGGAGAAGTGAAAGCAATCTTGAACAAAGGTATTGTGGCAAATGAATTGCAGTCCCATATGGCAGCACTTCCTGCAACCGCTCAGGAAAAGATCAGTGCTCTTTTTGAGGCCTTATTTGATGGAATTGAGAAAGGGTTTGCAAAAGAAGTGGTCAAGAAGAAGCGCTACCTTGTTGCTGCAGTTTCCATGGGTGAGGGATCGCAGTTGCTATTGCTTCATGCAATTGAAGCATTTTGTATAAAGTCCACTTCCAATGCTTCGAAGGAGATTGCCATTGTTTTGAAGGCACTCTATGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAGAGGGGCTAAAGGGCGACAAAAAGGATTCTCAGATATGGAAGAAGGCCAAACCTTTGATTGATTGGCTTCAAAATGCGGAATCAGAATCAGAGGAAGAATAA 1443 0.4331 MHHIGVGLAFLQVLLQQIPRKRFKLSFMFERAITHLGPIELLGECNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKVGTSHVNGAHDTAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTAFIIKNPPETRKGSKDKKAMRRAEKERLKEGEAADEEQKKTKKDAKKKGSSTSKDETAKSSSTKKKASGSDEDRRSPTHAQVDEKEETPDEDEVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTDEPEKKENAASKKSDGSENGNSMHYRKLVGEVKAILNKGIVANELQSHMAALPATAQEKISALFEALFDGIEKGFAKEVVKKKRYLVAAVSMGEGSQLLLLHAIEAFCIKSTSNASKEIAIVLKALYDADVLEEEHIVQWYQEGLKGDKKDSQIWKKAKPLIDWLQNAESESEEE 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13996g00006 480 Pfam eIF4-gamma/eIF5/eIF2-epsilon 402 480 IPR003307 GO:0005515
Mupr13996g00006 480 MobiDBLite consensus disorder prediction 187 276 - -
Mupr13996g00006 480 ProSiteProfiles W2 domain profile. 323 480 IPR003307 GO:0005515
Mupr13996g00006 480 Gene3D - 146 186 - -
Mupr13996g00006 480 SMART 542_3 388 476 IPR003307 GO:0005515
Mupr13996g00006 480 SUPERFAMILY ARM repeat 333 474 IPR016024 -
Mupr13996g00006 480 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 45 479 IPR045196 GO:0003743|GO:0006413
Mupr13996g00006 480 MobiDBLite consensus disorder prediction 189 265 - -
Mupr13996g00006 480 FunFam Eukaryotic translation initiation factor 5 42 145 - -
Mupr13996g00006 480 FunFam Eukaryotic translation initiation factor 5 326 471 - -
Mupr13996g00006 480 Coils Coil 200 220 - -
Mupr13996g00006 480 Pfam Domain found in IF2B/IF5 52 168 IPR002735 GO:0003743|GO:0006413
Mupr13996g00006 480 SMART eIF2Bneu4 56 170 IPR002735 GO:0003743|GO:0006413
Mupr13996g00006 480 Gene3D - 328 480 - -
Mupr13996g00006 480 Gene3D - 43 145 - -
Mupr13996g00006 480 FunFam Eukaryotic translation initiation factor 5 146 186 - -
Mupr13996g00006 480 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 50 142 IPR016189 GO:0003743|GO:0006413
Mupr13996g00006 480 CDD W2_eIF5 367 478 - -
Mupr13996g00006 480 MobiDBLite consensus disorder prediction 306 327 - -
Mupr13996g00006 480 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 139 174 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13996g00006 Mupr-Chr13996 21019 22755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13996g00006 46 473 Eukaryotic Initiation Factors Gene Family AT1G36730 62.443 1.04e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13996g00006 K03262 - gmx:100796565 749.199